Coturnix japonica (Japanese quail): 107319509
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Entry
107319509 CDS
T04297
Name
(RefSeq) cadherin-1 isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04371
Apelin signaling pathway
cjo04514
Cell adhesion molecules
cjo04520
Adherens junction
cjo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107319509
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107319509
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107319509
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107319509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107319509
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjo04515
]
107319509
04090 CD molecules [BR:
cjo04090
]
107319509
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107319509
Cell adhesion molecules [BR:
cjo04515
]
Cadherins
Major cadherins
107319509
CD molecules [BR:
cjo04090
]
Proteins
107319509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
He_PIG
TM_ErbB1
Cadherin_4
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
107319509
NCBI-ProteinID:
XP_015729859
LinkDB
All DBs
Position
11:16826666..16835234
Genome browser
AA seq
916 aa
AA seq
DB search
MGRRWGSPGPQRFPVLVLLLLLQVCGRRCDEAAPCQPGFAADTFTFSVPRDSVAAGRELG
RVSFAACSGRPWAVYVPSDTRFKVNMEGVVSTKRPLTLHGREISFIIYARDATGKRHSAR
VTVGRHRHRRHYHHQHLQDMTPSVLTFPEHDSGFLRRQKRDWVIPPISCLENHRGPYPMR
LVQIKSNKDKESKVYYSITGQGADSPPVGIFIIERETGWLEVTEQLDREKIDRYTLFSHA
VSASGQPVEDPMEIIITVMDQNDNKPVFVKEVFVGYIEENAKPGTSVMTVNATDADDAVN
TDNGIVSYSIVSQQPPSPHPQMFTIDPAKGVISVLGTGLDRETTPNYTLIVQATDQEGKG
LSNTATAIIEVTDANDNIPVFNPTMYEGVVEENKPGMEVARLTVTDQDAPGSPAWQAVYH
IKSGDQDGAFSITTDPRTNNGILRTAKVGHVPASGPRVGHVPIGPTTTSTLHPTLQGLDY
ETKSRYDLVVTVENKVPLSVPITLSSASVLVTVLDVNEPPVFMPPVKRVEVPEDLPVGHE
VTSYTAKDPDRDMRQKITYRMGSDPAGWLAIDAQNGIVTATQPLDRESVHAINSTYKAII
LAVDNGVPDSTGTGTLLLLLQDVNDNGPTPEPRSFEICSRQPEKQVLSIVDKDLPPHTYP
FTVALEHGSSNNWTVSIISQDELAVGLKKELEPGEYSIFVKLTDGQGKTQVTQVKAQVCE
CEGTAKNCERRSYIVGGLGVPAILGILGGILALLILLLLLLLFARRRKVEKEPLLPPEDD
MRDNVYNYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEI
GNFIDENLKAADTDPTAPPYDSLLVFDYEGGGSEATSLSSLNSSASDQDQDYDYLNEWGN
RFKKLAELYGGGEDDD
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggccggcggtggggttcccccggcccgcagcgcttccccgtgttggtgctgctgctg
ctgctccaggtgtgcggccggcggtgcgacgaggcagccccctgccagcccggctttgct
gcagacaccttcaccttcagcgtgccccgggacagcgtggcggcgggcagggagctggga
cgagtgagctttgcagcctgcagcgggcggccgtgggccgtgtatgtcccgtctgacacg
cgcttcaaggtgaacatggaaggcgtcgtctcaacaaaacggccactgacgctccatggg
agggagatcagcttcatcatctacgcacgggatgccacgggcaagaggcactcagcacgg
gtgactgtgggcaggcacaggcaccgccgccactaccaccaccaacacctgcaggacatg
acaccgtctgtgctgaccttccccgagcatgactccggcttcctccggaggcagaagagg
gactgggtcatcccccccatcagctgcctggagaaccaccggggcccctaccccatgagg
ctggtgcagatcaaatccaacaaggacaaggagtccaaggtgtactacagcatcacgggg
cagggcgcggacagcccgcccgtgggcatcttcatcatcgagcgtgagacggggtggctg
gaggtgacggagcagctggaccgggagaagatcgatcgctacaccctcttctcccacgcc
gtgtcagccagcgggcagcccgtggaggaccccatggagatcatcatcacggtgatggac
cagaacgacaacaagcccgtgttcgtcaaggaggtctttgttggctacatcgaggagaac
gccaagccaggcacctccgtgatgaccgtgaacgccacggatgcggacgatgcggtgaac
acggacaacggcatcgtcagctactccatcgtcagccagcagccgcccagcccgcacccc
cagatgttcaccatcgacccagccaagggcgtcatcagcgtgctgggcacagggctggac
cgggagaccactcccaactacacgctgattgtccaggccaccgaccaggagggcaagggt
ctgtccaacaccgccacggccatcattgaggtcacggatgccaacgacaacattcccgtc
ttcaaccccaccatgtacgagggggtggtggaagagaacaagccgggtatggaggtggcc
aggctgacggtgacggaccaagacgcaccaggctccccagcctggcaagccgtttaccac
atcaagagtggggaccaggatggtgccttcagcattaccaccgaccccaggaccaacaat
ggcatcctgaggacagccaaggtgggtcacgtccctgccagtggccccagagtgggtcat
gtccccatcggccccactaccacctcaacccttcaccccaccctgcagggcctggattat
gagaccaagagccgctatgacctggtggtgacggtggagaacaaagtgcccctgtctgtg
cccatcacactctcctccgccagcgtcctggtgactgtcttggacgtgaatgagccccct
gtcttcatgccccctgtcaagagggtggaggtaccagaggacctaccagtggggcacgag
gttacatcctacacggccaaagaccccgacagggacatgagacagaaaatcacgtaccgc
atgggcagcgacccagcaggctggctggccattgacgcccagaacggcatcgtcacggcc
acccaaccgctggaccgtgagtcggtgcacgccatcaacagtacatacaaggccatcatc
ctggctgtggacaatggggtgccggatagcaccggtacggggacgctgctgctgctcctc
caggatgtgaatgacaacgggcccaccccagagccacggtcctttgagatctgcagccgg
cagcctgagaagcaggtgctgagcattgtcgacaaggacctgcccccacatacctacccc
ttcacagtagcactggagcatggttccagcaacaactggactgtcagtataataagccaa
gatgagctggccgtgggcctgaaaaaggagctggagccgggcgagtacagcatctttgtg
aagctgacggacggccagggcaagacacaggtgacacaggtcaaagcccaggtgtgtgag
tgtgaagggacagccaagaactgcgagcggaggtcatacatcgtcggtgggctgggtgtc
cctgccatcctgggcatcctggggggcatcctggccctgctgatcctgctgttgctgctg
ctgctctttgcccggcgacgcaaagtggagaaggagccgctgctgccgcctgaggatgac
atgagggacaatgtctacaactacgatgaggagggcggcggcgaggaggaccaggactac
gacctgagccagctgcaccgcggcctggacgcccgccccgaggtgatccgcaatgacgtg
gcccccccgctgatggccgccccccagtaccggccccggcccgccaaccccgatgagatc
ggaaacttcatcgatgagaacctgaaggcggctgacacggaccccacggcccccccctac
gactcgctgctggtgttcgactacgagggcggagggtcggaggccacctcgctcagctcc
ctcaactcctccgcctccgaccaggaccaggactacgactacctcaacgagtggggcaac
cgcttcaagaagctggcggagctctatggcggtggggaggatgatgactag
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