Coturnix japonica (Japanese quail): 107319878
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Entry
107319878 CDS
T04297
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04510
Focal adhesion
cjo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107319878
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107319878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Tropomyosin
LegC3_N
F5_F8_type_C
Laminin_II
Motif
Other DBs
NCBI-GeneID:
107319878
NCBI-ProteinID:
XP_015730670
LinkDB
All DBs
Position
12:9068247..9080341
Genome browser
AA seq
1827 aa
AA seq
DB search
MDVLVLSLLLAGVPASGGWEEPDPSQGCARGSCYPATGNLLVGRAQQLSASSTCGLQGPQ
EYCIVSHLQDSEKCFTCDSRNPALRESHRIENVIYLHGPHSERSWWQSENGVECVSIQLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADSGRSWKVYRYFAYNCSKLFPGVPTHPSGHIG
EVLCEQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPDIQELLRVTNLRVNLTKLHTLGDN
LLDSRQEVLHKYYYAVDELVMRGSCFCHGHAAECAPAPGAPPSVPGMIHGRCVCKHHTQG
LNCERCEDFYHELPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNSSGAVCDGCQ
HNTMGRRCHLCKPFYYRHPRSDIRAPTACVPCDCDPAGSLDGGACDAHTDVALGMIAGQC
RCKENVAGPRCDRCQHGAYGLSQGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVA
GRSCSQCVPEFWGLSYDVGGCRPCSCDFGGAYSNRCSMEDGACPCRPHLMGRQCDQVQPG
FFCAPLDHYTYEAEQATGHGPSHPQLPGAVRAEVPQDCPQHRNGDPAGRKARARPQRSPP
RAPQPRTAPHHSVQRPPKPDVEPVLRDGDGRMVTWTGPGFARVRDGAGLTFHVDNVPYPM
EYELLLRYEPESTEDWEAVVSVSSRALPTSPRCGNLLPSEQMYREGLPHSQRYVLLSRPF
CFEPSTPYEVTVRLQRAGVTQRHPSAFILIDSLVLLPRVPELPGFHGAAAEAVQRLEELE
RYRCLEAFHMAPPHTLAEACARLICSVSAMLHDGALPCQCDPQGSRSSVCQVQSGQCECK
PHVLGRRCDRCAAGSYGFGPTGCSPCACSPEGSVSQLCDAGSGQCRCQPGIVGRQCDHCQ
PGHWGFPSCRPCQCNGHTEECDLRTGSCLHCRDHTTGRHCERCQDGYYGDPVLGSGQQCR
PCPCPGYPGTQHYHGSACHADEETDHIVCLCAPGYTGPRCDRCSPGYFGMPEVEGGVCRP
CQCNNNIDPSDPGACDPHTGHCRRCLYHTAGPRCAQCQPGYFGNALQRSCRRCSCDPRGT
LSAHCTAGTCSCDRATGACACRANVVGRSCDRCAPNFWNLGGAGGCQPCGCHPMHSTHPA
CDEVTGQCRCHPGFGGRVCSQCQENHWGDPELQCRACECEPLGAESPQCDRASGQCQCRP
GFGGLRCDRCQRGYQTAFPLCSPCHPCFGRWDAVLGSLQDGLQHLGARVQALREGGAAAP
LSPRLRALEDALKHVERLLGEGSSPSSPLLQELAGQLDGTSTELDNFWKRLQELEQHVDQ
LEQADALHHGRLARLSHELGGLNQTTSHLQAVLGTVTAAGFRDSYRSIVAAARDSRQAEV
VANGTAGELSAARAMQQAAEQALQQRGDAFRRSTAAQRKSLREAQKRVSGLSVAGINKKV
CGAPGDRSCAESLCGGALCQDSAGTRHCGGVGCTGAMPVSDQALSSARNASQQLEVALGQ
LSAVTQKMQEVQDLARGARSRAEEALERSQAARSRTEKATAQLRDFIRRIKAFLSEEGAD
PGSIELVARQVLNISLPSSPARIQELLREIQESISQLDGVDAVLNGTAQGLEAAQELLAQ
GQDARERAEGVRDELAETQLALQVARSQVTATGSTLRSAKDSIRAAEGKAREAERRLQAL
QGKESRLQRRLRELAQRVTNLQQRRRDAQRLAQDAQDGAQRATAASRTLSQDLAQVTQRY
VMLKGRVSGMAGAAGGALQRVTRLTAEARDLLDKANSSKKRLEELEQHFGANEQAMADKA
TRLQALERQVSGLLQEIRERANAYATC
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctggtgctctctctcctcctggcgggggtgccagcatcagggggctgggaa
gagccggatccatcccagggctgcgcccgcggcagctgctacccggccaccggcaacctg
ctggtggggagagcacagcagctcagcgcctcgtccacctgcgggctgcagggaccccag
gagtactgcatcgtcagccacctccaggactctgagaaatgcttcacgtgcgactcacga
aacccggccctgcgtgagagccaccgcattgagaacgtaatctacctgcatggcccccac
agcgagaggagctggtggcagtcagagaatggcgtggagtgcgtcagcatccagctggac
ctggagggcgagttccacttcacacacctcatcatgaagttcaagaccttccgccccgca
gccatgctggtggagcgctcggccgactcaggccgcagctggaaggtgtatcgctacttc
gcatacaactgctccaagctgttccccggcgtccccacgcatccctcggggcacatcggc
gaggtgctgtgtgagcagcgctactctgagatcgagccctccagccacggcgaggtcatc
ttcaaggtgctggacccctccatcccagtggcggacccatacagccctgacatccaggag
ctgctgcgtgtcaccaacctgcgggtgaacctcaccaagctgcacacgctgggggacaac
ctgctggactcacggcaggaggtgctgcacaaatactactacgcagtggatgagctggtg
atgcgcgggagctgcttctgccacggccacgccgccgagtgtgcgcctgcacctggtgct
ccgccatctgtccccggcatgatccatgggcgctgtgtttgcaagcaccacacgcagggg
ctgaactgtgagcgctgcgaggacttctaccacgagctgccctggcgcccggctgagggc
tccagcaccaacgcctgccgccggtgcgactgcaacgagcactcacggcgctgccacttc
gacatggccgtgttcctggccactgggaatagcagcggggccgtgtgtgacggctgccag
cacaacaccatgggccgccgctgccacctctgcaagcccttctactaccggcacccacgc
tccgatatccgcgctcccaccgcctgcgtcccgtgtgactgtgaccctgcgggatcgctg
gacggcggcgcctgtgatgcccacacggacgtggcgctgggtatgattgcggggcagtgc
cgctgcaaggagaacgtggctgggccgcgatgcgaccgctgccagcacggagcctatggc
ctcagccagggagaccctcagggctgccagccgtgccgctgtgacccacggggcacggtg
gcgggcagctccccctgtgatcccatcagcggggactgctactgcaagcgcttcgtggcc
gggcgctcctgcagccagtgcgtgcctgaattctggggcctgagctatgatgtagggggc
tgccggccctgctcctgtgactttggaggagcctacagcaaccggtgctccatggaggac
ggggcctgtccctgccgcccccacctcatgggccggcagtgtgaccaggtgcagcctggc
ttcttctgtgcaccccttgaccactacacctatgaagctgagcaagccacaggccacggg
cccagccacccccagctcccaggcgctgtgcgtgcagaggtgccccaggactgcccccag
caccgcaatggggacccagcagggcggaaggcacgtgctcggccccagcgcagccctccc
cgtgccccccagccccgcacagccccacaccacagcgtccagcgaccccccaagcctgac
gtggagccggtgctgcgggatggggacgggcgcatggtgacgtggactggaccggggttt
gcccgtgtgcgggatggggctgggctgacattccacgtggacaacgtgccctatcccatg
gagtacgagctgctgctgcgttatgagcccgagtcaacggaggactgggaggctgtggtg
agcgtcagctcccgggcgctgcccaccagcccccgctgtgggaacctgctgccctccgag
cagatgtaccgcgagggcctgccccacagccagaggtatgtgctgctgtcccggcccttc
tgctttgagcccagcaccccatatgaagtaactgtgcggctgcagagagccggtgtcacc
caacgccaccccagtgccttcatcctcatcgattcactggtgctgctgccacgtgtgcca
gagctgccgggcttccacggggcagcggcggaggcggtgcagcgtctggaggagctggag
cgctaccggtgcctggaggctttccatatggccccaccacacaccctggccgaggcctgc
gcccgcctgatctgcagcgtctcagccatgctgcatgacggagcactgccctgccagtgc
gacccgcagggctcccgcagcagcgtgtgccaggtgcagtcagggcagtgtgagtgcaag
ccccacgtcctcggccgccgctgtgaccgctgtgcagccggcagctatggctttggaccc
acggggtgcagcccctgcgcctgctccccagagggctccgtgtcccagctgtgtgatgca
ggcagtgggcagtgccggtgccagccaggcatcgtgggccggcagtgtgaccactgccag
ccgggacactggggcttccccagctgcaggccatgccagtgcaatgggcacactgaggag
tgcgacctgcggacgggcagctgcctgcactgccgtgaccacaccactggccggcactgc
gagaggtgccaggatggttattatggagacccggtgctgggctcagggcagcagtgccgt
ccctgtccctgccctgggtaccccggcacgcagcactaccacggcagcgcctgccatgcc
gatgaggagactgaccacatcgtgtgcctctgtgcacctggatacaccgggccccgctgc
gaccgctgctctccgggctactttgggatgccggaggtggagggaggagtgtgccggccc
tgccagtgcaacaacaacattgaccccagcgacccgggggcctgtgacccgcacaccggg
cactgccgccgctgcctgtaccacaccgccgggccccgctgtgcccagtgccagcccggc
tattttggcaatgccctgcagcgcagctgccgccgctgtagctgtgaccctcggggaaca
ctgtctgcccactgcaccgctggcacctgcagctgtgaccgtgccacgggagcctgcgcc
tgcagagccaatgtggtgggcaggagctgcgaccgctgtgcacccaacttctggaacctg
gggggagcggggggctgtcagccttgtggatgccatcccatgcactccacacaccctgct
tgcgatgaggtcacggggcagtgccgctgccaccccggctttggtggccgtgtctgttcc
cagtgccaggagaatcactggggagaccctgagctgcagtgccgagcctgcgagtgtgag
ccgctgggtgccgagagcccacagtgcgaccgagccagtgggcagtgccagtgccggcca
ggctttggggggctgcgctgcgaccgctgccagcggggctaccagactgccttccctctc
tgctctccgtgccacccttgctttgggcgctgggatgcagtgctgggcagcctgcaggat
gggctacagcaccttggggcacgggtacaggcactgcgcgagggaggggctgcagcccca
ctcagcccccgcctgcgagcgctagaggatgccttgaagcatgtagagcggctgctgggt
gaggggagcagccccagtagccccctcctgcaggagctggccgggcagctggatggcacc
agcactgagctggacaacttctggaagaggcttcaagagctggagcaacatgtggatcag
ctggagcaggctgatgcgctgcaccacggtcggctggccaggctgagccatgagctgggt
gggctcaaccagaccacctcccatctgcaagctgtcctcggcaccgtgacagcagcagga
ttcagggactcataccggagcatcgtggcggcagcacgggactcacggcaggcagaggtg
gtggccaatggcacagcaggtgagctgagtgcagcacgggccatgcagcaggcagctgag
caggcactgcagcagcggggcgatgcgttccgccggagcacggccgcacagcgcaaatcc
ctgcgggaggcacagaaacgggtgtcagggctcagcgtggccgggatcaataagaaggtt
tgtggagctcctggagaccggagctgtgcggaatcgctgtgtggaggagctctgtgccag
gacagtgcggggacgcggcactgcgggggggtgggctgcacgggggccatgcctgtgtca
gaccaagccctgagcagcgcccgcaatgcttcacagcagctggaggtggccctgggacag
ctgagtgctgtgacacagaagatgcaggaggtgcaggacctggcgcggggtgcccgcagc
cgtgcagaggaggcgttggaacgttcccaggctgcccgcagccgcacagagaaggcgaca
gcgcagctgagggacttcatccgccgcatcaaagccttcctgtcagaggagggagcagat
ccaggcagcattgagctggtggcacggcaggtgctgaacatctccctgcccagcagccct
gcacgcatccaggagctgctgcgggagattcaggagagcatcagccagctggatggggtg
gatgcagtgctcaatggcacggcgcaggggctggaggctgcacaagagctgctggcacag
ggacaggatgccagggagcgagcggaaggcgtgagggatgagctggcagagacacagctg
gcgctgcaggtggcacggtcacaggtgacggcgactgggagcaccctgcggagcgccaag
gacagcatccgggctgctgagggcaaagccagggaggcggagcgcaggctgcaggcgctg
caggggaaggagtcacggctgcagcggcggctgcgtgagctggcacagcgtgtcaccaac
ctgcagcagcgcagacgggacgcccagcgcctggcacaggatgcccaggatggagcacaa
cgtgccaccgccgcctccaggacgctcagccaggacctggcgcaggtgactcagcgctac
gtgatgctcaagggccgggttagtgggatggcaggggcggccggcggggccctgcagcgt
gtgacacggctgacggccgaggccagggacctgctggataaagccaacagcagcaagaag
cggctggaagagctggagcagcacttcggggccaacgagcaggcgatggcggacaaggcg
acgcggctgcaggcgctggagcggcaggtgtcggggctgctgcaggagatccgcgagcgg
gccaacgcgtacgccacctgctaa
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