Coturnix japonica (Japanese quail): 107320089 Help Entry 107320089         CDS       T04297                                  Symbol RAD50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism cjo  Coturnix japonica (Japanese quail) Pathway cjo03440   Homologous recombination cjo03450   Non-homologous end-joining cjo04218   Cellular senescence Brite KEGG Orthology (KO) [BR:cjo00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     107320089 (RAD50)    03450 Non-homologous end-joining     107320089 (RAD50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     107320089 (RAD50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cjo03032]     107320089 (RAD50)    03400 DNA repair and recombination proteins [BR:cjo03400]     107320089 (RAD50) DNA replication proteins [BR:cjo03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     107320089 (RAD50) DNA repair and recombination proteins [BR:cjo03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      107320089 (RAD50)     BRCA1-C complex      107320089 (RAD50)    NHEJ (non-homologous end-joining)     MRX complex      107320089 (RAD50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 AAA_21 AAA_15 Rad50_zn_hook SbcC_Walker_B SMC_N AAA_29 DUF2703 TolA_bind_tri AAA_24 AAA_13 Motif Other DBs NCBI-GeneID:  107320089 NCBI-ProteinID:  XP_015731082 UniProt:  A0A8C2UGR1 LinkDB All DBs Position 13:complement(1248519..1265614) Genome browser AA seq 1316 aa AA seqDB search MAKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR TKHGEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF SATRYIKALETLRQVRLKQGAKVKECQAELKYLKQNKEKAQEIRDNLANREAQLSASKEN IKSIESQLEPLKTSLATVEKSLMKVMMLDNDVKALESRRRQMEKDNQDLQQKMQKVFQGT DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRASKECQRFNSEKSELLIERGRLQLQADRH QEHIKVRDSLIHALSAQLELDGFEQAPFNDRQIAVFHELLKERQKSDIEAANQLMREFTQ KEAMKQKQIDEIRDRKTGLERTIDLKSDIQSKREAELKNAKYELRQLEGSSDRIVELDQE IIKTEHELEKAERNSNVETLEKEVQTLQKEKINLDKVLRRLDQEMEQLNLHTTTITQMEM LKKDKADKEEQIRKVKSRHSEELTLLLGYFPNKKQLEDWLHGKSTEINETRNRYALLNKQ LASAEQQKNYISAELRKKEEQLSSFEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQRAVLA GATAVYSQFITQLTEENRSENQPCCPVCQRVFQTDAELQDVISDLQSKLRLAPDKLKSTE SELKKREKKRDEMMGLKPIRQTVVELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLLQ TVLSEKEGANACLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLNRTVLQVSQEKQEKK HLWDTVTSKIELNQKMKQDQQNQIQELKSTVNELRAEKLQISSSVQRRQQLEEQTVELTT EVQSLYREIKEAKEQVFPLDATLEKLQQDKEDLINKRTASNKEIQEKMNGITEKVKDINK YMKEIENYIQQGKEEYKKQKECELDEVNSQLVACEKQKEKISKEMEIIRQDIDTQKIQER WLEDNLTLRKRNEELKEVEDNIKQLVKEMGEMKVPQLKNEQKNLEEKIEALKRNHHVALG RQRGFEEEIIRFKKELRESQFKDAEEKHREMMIVMRTTELMNKDLDIYYKALDKAIMTFH SMKMQEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALD MRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSR SRQRNFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atggcaaagattgagaaaatgagcatcctgggagtgaggagtttcggtgtggaggacaaa gacaaacagatcatcaccttctttaaccccctgaccatcctggtgggacccaacggcgca gggaaaacgaccatcattgagtgccttaaatacatctccaccggagatttccctcctggt accaaaggaaattcgtttgttcatgatccaaaggttgccaacgaaacagatgtgagagct cagattcgattacagttccgagatgttaatggagagctcgtagctgtccaacgatccatg gtttgtacccagaaaagcaagaaaacagaatttaaaacacttgaaggggtcattaccaga acaaagcatggcgagaaggtgagtctcagttccaagtgtgcagaaattgatcgagagatg atcagtgccctcggtgtttccaagtcggtgcttaacaacgtcattttctgccaccaagaa gaatccaactggccgttaagcgaagggaaggctctgaagcaaaaatttgatgagatcttc tcagcaacaaggtatattaaagccctggaaactctccgtcaagtacggctgaaacaaggc gcgaaagtaaaagaatgtcaggcagaactgaaatacctaaaacagaataaagaaaaagcc caggaaatccgggacaatcttgccaacagagaagctcagctgtctgcttctaaggagaat ataaagtctattgagagtcagcttgaacctttaaagacttctctggcaacagttgagaag agtctcatgaaagtgatgatgctggacaatgatgtgaaagccctggaaagcaggaggagg cagatggaaaaggataatcaagatctgcaacagaaaatgcaaaaggtttttcaaggaaca gatgaacagctcagggatagataccagaaccaccagagaacagtgaaggaaaaggagaag aggttatcagactgtaagcgggaattagatagagcctctaaagaatgccagagatttaac agtgagaagtcagaactacttattgaacgaggtcgtctacagctgcaagcagatcggcac caagagcacatcaaagtgagggattccttaattcatgctttgtcagcacagctggaatta gatggctttgagcaagcaccttttaacgacagacagattgccgtctttcatgagttattg aaagagaggcagaagagtgatatagaagctgcaaatcagttaatgagagaattcacacag aaagaggcaatgaagcaaaaacagattgatgaaataagagataggaaaactggattagag agaaccattgacctgaaatcagacattcaaagtaagagggaggctgaactgaagaatgca aagtatgaactgcgtcagttggagggctcttcagacagaatagtggagttggatcaggag atcataaagacggagcatgagctggagaaagctgagaggaacagcaatgtagaaactctg gaaaaggaagtgcaaactctgcagaaggaaaaaatcaacctggacaaagttcttcggagg ttggatcaggagatggagcagctgaatctacacaccacaactattacccaaatggagatg ctgaagaaagacaaagcagacaaagaggagcagattaggaaagtaaaatcgagacattct gaagaactgaccctactgctgggatatttcccaaacaaaaaacaacttgaagactggctt catggcaaaagcactgagattaacgagacaaggaacagatacgccctgctaaacaaacag ctggcatcagcagagcagcagaaaaattacatcagtgctgaactaaggaaaaaagaagag cagttgtccagctttgaagcaaagctttttgatgtttgtggaagccaagattttgacagt aacctgaacaaactgcaggatgagattgaaaaaagttcaaagcagcgagctgtgcttgct ggagccactgcagtttattcacagttcattacgcagctgacagaggagaaccggtcggag aaccagccgtgttgtccagtttgccaaagagtttttcaaacagatgctgaactgcaagat gtgatcagtgatctgcagtcaaagctgcgcctcgccccagacaaactgaagtcaacagag tctgaacttaaaaaaagggagaaaaaacgtgatgagatgatgggtcttaaaccaattagg caaactgtagtggaactccaagaaagggacataccggacttgaggaacaggctgcagact gtgaacagggattttgcacgcctgaagggtgagatagaagaacaggaaacacttttgcaa acagttctgtctgaaaaggaaggtgccaatgcctgtttacaggacataactctcatggaa aggtaccagactgatattagggacgttgaaagaaaaattgctcagcaggaggctaagttg ttaggggttgatttaaatagaactgttctgcaagtaagccaagagaaacaagagaaaaaa cacttgtgggatacagttactagtaaaattgagttaaaccagaaaatgaagcaggaccag caaaatcaaattcaggagctgaagagtacagtgaatgaactcagagcagagaaacttcag atttccagcagtgtgcagcgtcgtcagcaactggaggaacagacagtggaattaaccact gaggttcagtccttatacagagagatcaaggaagcgaaagagcaggtatttcctctggat gcaactttagaaaaactgcagcaagacaaggaggatctcattaataaaaggactgcaagt aataaagaaatacaagagaagatgaatggcataacagagaaagttaaagatataaataag tacatgaaagaaattgaaaactacattcaacaaggaaaggaagaatataagaagcaaaag gagtgtgaacttgatgaggtcaattcccagttagttgcctgcgagaagcagaaggaaaag attagtaaagagatggaaattattcgacaggatattgacactcagaagatccaggagaga tggctggaggataatcttactttgaggaagcggaatgaagagttaaaagaagtagaagac aatataaaacaacttgtaaaggagatgggagaaatgaaagtcccacagttgaaaaatgaa cagaaaaatttagaggagaaaatagaagcactgaaaagaaaccatcacgttgcattgggc cgacagcgtggatttgaggaagagatcattcggtttaaaaaggagcttcgagagtcacag ttcaaggatgcagaggaaaaacacagggagatgatgattgttatgagaacaacggagctg atgaacaaagatttggacatctattacaaggccctggataaagcaataatgacatttcat agcatgaagatgcaagaaattaacaaaataatccgtgacctttggcgaagtacctacaga gggcaagacattgaatatatagaaattcgttctgatgcagacgaaaatgtttcagcatct gataaaagaaggagttacaattacagagtggtgatgataaagggagatacggcgctggat atgcgaggaagatgtagtgctgggcaaaaggtactcgcttctctcattatccgtctcgct ctggcagaaacgttctgcctcaattgtggcatattggcactagatgaacccactaccaat ctcgatcgagaaaatatagaatctcttgcacatgccctcgtggagataatcaaaagccgc tcacgacaacgaaactttcagctcctggtgataactcacgatgaagattttgtggaactc cttggccgttctgagtatgtggaaaccttctacaggatcaagaagaacattgaccagtgc tccgagatcatgaagtgcagcgtcagctcccttggctcatacgttcattaa

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