Coturnix japonica (Japanese quail): 107320322
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Entry
107320322 CDS
T04297
Symbol
PDLIM7
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107320322 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjo04990
]
107320322 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
cjo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107320322 (PDLIM7)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
Motif
Other DBs
NCBI-GeneID:
107320322
NCBI-ProteinID:
XP_015731532
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Position
13:complement(11968846..11989611)
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AA seq
808 aa
AA seq
DB search
MGEMESYKVMLNGPAPWGFRLQGGKDFSMPLSISRLTPGGKAAQAGVGVGDWVLYIDGES
TSTMTHIEAQNRIRACGDRLCLTLSRSQNHLGKPQKVQSLDKKPQEHPTSPKYDPSKLHL
IEDSEDWQPRNTSTQSRSFLKLAQLTGTDSFEDHEDELVRKPRGPRVSFWGTEEEWQSVH
PPGTPACDPGKLRLMEDAEDWQPRTGTSQSRSFRKLARLTGTDGLEDHEDEPVRKPRDAR
GSFCGTEEQWQPPPHVEPPTTPACDPGKLRLMEDAEDWQPRTGTSQSRSFRKLARLTGTD
GRFEDHEDEPVRKPRDARGSFCGTEEPWQPPPHVEPPTTPACDPGKLRXXXXXEDWQPRT
GTSQSRSFRKLARLTGTDGLEDVFAKNPSRDARGSFCGTEEQWQPPPHVEPPTTPACDPG
KLRLMEDAEDWQPRTGTSQSRSSANWPRLTGTDGLEDHEEEPVRKPRSPHVLFCGTEEPR
QPLPHVEPPTTPACDPGKLRLFEDAEDWQPRTGTSQSRSFRKLARLTGTDGLEDDDVFIK
KPSQVSVPDPSPGAAMKTEPGLAPRTPAATPGPTSRPPWAVDPSFAERYAPDKTSTVLSK
HSQPATPTPMQNRSSIVQAAQQAPEGPGRTPLCFKCNKIIRGRYLVALGHYYHPEEFTCC
QCRKVLDEGGFFEEKGSIFCPKCYDTRYAPSCAKCKKKITGEVMHALKMTWHVQCFTCAA
CKTPIRNRAFYMEEGQPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCA
ICQTNLEGKTFYSKKDKPLCKSHAFSHV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagatggagtcctataaggtgatgctgaacgggccggcgccctgggggttccgg
ctgcagggagggaaggacttcagcatgccgctctccatctccaggctgactccaggtgga
aaggctgcccaggccggcgtgggagtgggcgactgggtgctgtacattgacggggagagc
accagcaccatgacacacatcgaggcccagaacaggatccgcgcatgcggggacaggctc
tgcctcaccctgagcagatcccagaaccacctggggaagccgcagaaggtgcagagcctt
gacaagaaaccacaggagcaccccacttcccccaaatatgaccccagcaagttgcacctg
atcgaggactctgaggactggcagccccgcaacaccagcacccagtcccgctccttcctc
aaactggcccagctgacgggcacagacagctttgaggaccacgaggatgagctggttagg
aagcccaggggtccacgtgtgtcattttggggtacagaggaggagtggcaatctgtgcac
ccccctggcacccctgcgtgtgacccgggcaagctgcggctgatggaggatgctgaggac
tggcagccccgcaccggcacctcccagtcccgctccttccgcaaactggcccggctgacg
ggcactgatggccttgaggaccacgaggatgagccagttaggaagcccagagatgcccgt
gggtcgttctgtggtacggaggagcagtggcagcccccaccccacgtggagccccccacc
acccctgcgtgtgacccgggcaagctgaggctgatggaggacgctgaggactggcagccc
cgcaccggcacctcccagtcccgctccttccgcaaactggcccggctgacgggcactgat
ggccgctttgaggaccacgaggatgagccagttaggaagcccagagatgcccgcgggtcg
ttctgtggtacggaggagccgtggcagcccccaccccacgtggagccccccaccacccct
gcgtgtgacccgggcaagctgcgnnnnnnnnnnnnnnnngaggactggcagccccgcacc
ggcacctcccagtcccgctccttccgcaaactggcccggctgacgggcactgatggcctg
gaagatgtgtttgctaagaatcccagcagggatgcccgcgggtcgttctgtggtacagag
gagcagtggcagcccccaccccacgtggagccccccaccacccctgcgtgtgacccgggc
aagctgcggctgatggaggatgctgaggactggcagccccgcaccggcacctcccagtcc
cgctcttccgcaaactggccccggctgacgggcactgatggccttgaggaccacgaggag
gagccagttaggaagcccagaagcccccatgtattgttctgtggtacggaggagccgcgg
cagcccctgccccacgtggagccccccaccacccctgcgtgtgacccgggcaagctgcgt
ctgtttgaggatgctgaggactggcagccccgcaccggcacctcccagtcccgctccttc
cgcaaactggcccggctgacgggcactgatggcttggaagatgatgatgtatttattaaa
aagcccagccaggtctccgtaccggacccatccccgggggcagcaatgaagacagaacca
ggattggcccccaggactcctgctgccacccctggccctaccagccgcccgccctgggct
gtggacccctcatttgctgagcgctacgcaccagacaagacgagcacggtgctgagcaag
cacagccagccggccacgccgacccccatgcagaaccgcagctccattgtgcaggcagcc
cagcaggcacccgagggccccggccgcacaccgctctgcttcaagtgcaacaagatcatc
aggggacgctacctcgtggccctgggacattattaccaccctgaggagttcacctgctgc
cagtgcaggaaggtgctggatgagggtggtttctttgaggaaaagggctccatcttctgc
cccaagtgctacgacacgcgctatgcacccagctgtgctaagtgcaagaagaagatcact
ggggaggtcatgcatgcgctgaagatgacctggcacgtgcagtgcttcacctgcgcagcc
tgcaaaactcccatccgcaaccgtgccttctacatggaggagggacagccctactgtgag
agagactatgagaagatgtttggcaccaagtgccgtggctgtgacttcaagatcgacgct
ggggaccggttcctggaggcactgggcttcagctggcatgacacttgcttcgtctgtgcg
atctgccagaccaatctggaagggaagacattctattccaagaaggacaagccgctgtgc
aagagccatgctttctctcacgtgtga
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