KEGG   Coturnix japonica (Japanese quail): 107320406
Entry
107320406         CDS       T04297                                 
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
  KO
K20775  BRCA1-A complex subunit RAP80
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107320406 (UIMC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107320406 (UIMC1)
DNA repair and recombination proteins [BR:cjo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     107320406 (UIMC1)
SSDB
Motif
Pfam: RAP80_UIM UIM zf-WRNIP1_ubi
Other DBs
NCBI-GeneID: 107320406
NCBI-ProteinID: XP_015731718
UniProt: A0A8C2TI31
LinkDB
Position
13:12093411..12126067
AA seq 774 aa
MPRRKKAAEGPDSRGQDGEVEEEEKRGAANAKKKRSFVDAFIVISDSDGEQESKEDSGLQ
TKRTKQQLDRTKFAAKKKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAES
LSSCQPLDSSDTTPQLSVDVLDTQGQSHPAEQEGCGILGGLASCPVTLSSKGSSHSQSTS
TDGSGQMDVARSPLVVLRRLSQEIVESSLVSSIIVSPGKSQPLTRSSEKSSSPPKSDSSP
LREDFISLSPTFGRVSSGSWRLTPRRLFTSPSSRAADHKPKEQPLPCSDHSAGEGSAGSS
AQLLKSWTTEQGGSRRMSGAGAGTKHTPHSRRAATVYVSTEQAEQNEVSSSSPELCMLDV
AEKKHEEEARDTVHYYWGIPFCPKGVDPNQYTNVILCQLEVYQKSLKQAQRQLLHKKEFG
NPIVPSSSLSQNELGKGEQISRENGVADDTEDGDAGTQKECENITWLLPSKKREAESPGH
SVEEEKNSASDDEPTTSYCQASQVLSTEGVRGDGEPMQTAQSVCTLTPLGSKRSPDIARQ
NSAEEEISVCPETQPSLSESIEPEREELSSVSKDAPMQAGADGGADRTLSEGNHMADHVP
CPLCDRVFPAAEIELHAMYCNGIAATDRPVLTRGRRESRSKAAGGEGSQASSDSDKCEKC
YLCKSLVPLLQYQRHVDSCLQAARQAQGTRKLRSTKVAARHKGGLLSMLELSESKSAGAD
TGTPIPAVEDRGNRPALPPGAEDAEPAEHSARSLLPPPSDPPPPRAGRRRKRKL
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgccaaggagaaagaaggccgcggagggtcctgactctcgaggtcaggatggagaggta
gaagaggaagagaagaggggtgcagccaatgccaagaagaaacgcagcttcgtggacgcg
tttattgttatatctgacagcgatggagagcaggagtcaaaggaagacagcggattgcaa
acgaaaagaacaaaacagcagctggatagaaccaagtttgctgctaaaaagaaaattgca
cagatgactgaagaggaacagtttgcactggccctgaaaatgagtgagcaagaagccaga
caagtgaactgtcaggaagaggaggaagaggaactcttgaggaaggccattgctgagagc
ctaagtagctgtcagcccttggattcctctgatacaaccccgcagttgtctgtggatgtg
ctggacacacaaggccaaagccaccccgctgagcaagagggctgtgggatcctgggaggc
cttgcatcttgccctgtcaccctttcctccaagggcagctcccactcacagagcaccagc
actgatgggagtggacagatggatgttgcccggagccccctggtagtgttgaggaggtta
agccaggaaatcgttgaaagctcactagtatccagcataatcgtgtctccggggaagagc
cagcctttgacaaggtcaagcgaaaagtcttcctcgccacctaagagtgattctagtccc
ctgagagaggacttcatctctttgagtcccacctttggcagggtttcttcaggttcctgg
cggctgacacctcggagactgttcacaagcccctcttccagagcagcagaccacaaacca
aaagagcagcccctgccctgctctgaccattctgcgggagaaggcagtgctgggagctca
gcccagctcctgaagagctggaccacagagcagggtggcagccgcaggatgagcggtgct
ggggcaggcactaagcacaccccacactccaggcgtgctgccactgtctatgttagcaca
gagcaagcagagcagaatgaggtgtccagctcttctcctgagctttgcatgctggatgtg
gcggagaagaagcacgaggaggaggcaagagacacagtgcactattactggggcatccca
ttctgccccaagggggtggaccccaaccagtacaccaatgtcatcttgtgtcagctggag
gtttaccagaaaagcttgaagcaggctcagaggcagctattacataagaaggagtttggt
aacccaattgtgcccagttcttccttaagccaaaatgagctcgggaaaggagagcagata
agcagagagaatggggttgcagatgacacagaagatggagatgcaggcactcagaaggag
tgtgagaacatcacctggctcctcccttcaaagaagagggaggcagaaagtccagggcac
agtgtggaagaagagaagaactctgcatctgatgatgagccaaccacaagctactgccag
gcctcccaggtgctgtccacagagggtgtgcgtggagatggggagcccatgcaaaccgca
cagagcgtctgcacattgaccccacttggcagtaagaggagcccagacattgccagacag
aactctgcagaagaagagatctccgtttgcccagagacccagccgagtctgtcggaaagc
atcgaaccagagagagaagagctttcctcggtcagcaaagatgcacccatgcaggctggt
gcagatggtggtgctgacaggactctgtctgagggcaaccacatggctgaccacgttcca
tgcccactgtgtgaccgagtgttcccagctgcggagatcgagctgcacgccatgtactgc
aatggcatcgccgccacggacagaccagtgctcactcggggtcggagagagtcacgaagt
aaagctgcaggcggtgaaggcagccaggcatcctcagattctgacaagtgtgagaagtgc
tacctctgtaagtcactggtgccactgctgcaatatcagaggcacgtggacagctgcctc
caggctgctaggcaagctcagggaaccaggaagctgcgaagcaccaaggttgcggcaagg
cacaaggggggactcctcagcatgttggagctctcggagagcaagtctgcaggtgctgac
acggggacccccatccctgcagtagaagaccgagggaaccgcccggcgctgccgcccggc
gccgaggatgctgagccggccgagcacagcgctcgctccctcctgccccccccgtccgac
cccccccctccccgtgccgggcgccgcaggaagcgcaagttgtga

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