Coturnix japonica (Japanese quail): 107320455
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Entry
107320455 CDS
T04297
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107320455 (SH3TC2)
Membrane trafficking [BR:
cjo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107320455 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SH3_1
SH3_9
TPR_8
SNAP
TPR_1
TPR_7
TPR_2
DCB
Motif
Other DBs
NCBI-GeneID:
107320455
NCBI-ProteinID:
XP_015731832
LinkDB
All DBs
Position
13:10544931..10561983
Genome browser
AA seq
1405 aa
AA seq
DB search
MKINSEVAASTAGSKHTSPLTHGSPYSVHLACSVRNPIMPGRTAGSTSMSSAPPAPSFTL
AAPEMPGDPLGWEHPFRALNASPHRPSFPAEECESCCPRSPLLPPHWDQLQHSTAEHRGR
WWWEKTMASGKAGTSEPSSPAEAAEGTPDPSSVLLAAGEGFPPEISLFFSIESRSSRCPN
AQLQEAARRKLWALENDDRDVCALFKELSARLLCIQAQEDRFLLTFKTLEEVWKFSTYLT
LGYVGHCLEQLLFEQEYWLNCALVEDTEVTVSMDENRLATIYLGLLLQEGHFYSRAVPSA
CQSEGEGQEGLQLCRNELVHVKNIGEESKWEAISLLTGQRGLVPVAALEPVPHPFYQWFL
KNYAMSFGISQEISGTTSQLIVKGKCTATADHRGAAWDELSFSKGDSIEVIGFLLPGLPW
FVGKSLSNGNIGFVPVRSVNAEACEPLEKGLVFLSEEENLLLLSIPCNGGEQHFATLLRE
LARTDITSVYRLDGFEPTAAFPKAPSEAVLRGCKDTQLLESWEEINSLVTASTSEQSSPG
SESAPATWEDVLLDKLNDFDDPKFFIDLNAGHMEDADVFEPILTFLNQDSYMPCFQSLYD
LSFSFLNSTFYGFSDEDELVLYLETSRNWAKRTHSVWAHVRLCFLLGKLCMKKVKFSQAR
VYFEEAMSTLDRGLEDLPLLAALHVNLASIYLKQNMKNKFSSLLGKMVALLVCLPSRSFS
SEHELRVMMYVLREAIAVGNAPLEARVCFLIVKLFLQLGKNDEVLPFIEHLQCLCTILFR
QDTRAVPLDATPILSYLYDKKCLPSIALASARSFVPSGIKGTPTPIWKAGFILQNMSKLL
GNQLERSSIPALACSYLKQALHFSCEGRAVTTQRSLSIILSRLYLQHGVLDGAVCYAAQA
VAFSRLIGEEEAFESSLSLGWMYLLSSQPGPAADIMGQLLHSLHGTDSVTQGGVVHNLLA
IALKGAGQVQKAAENYLQALHKAKETGNKRNQAIALANLGQLSQSRGASQLSELYLLQAA
QLYAELQGSEELELELVYVLLWLAQAMVSRRRMEDGKLCYELALVFALKWHNMRSQLHVT
EALCHFYSQVCPSLQACITYHEHRVSLAQKLQDRELEGNVRQTLSQLYQALGTPEALRLS
LDCTKQSLRIFIDLEDTGKAAEAWLQAGRLYYLMQEDELVDMYFQAAIETALKAENFSLA
MDLYEKAGDNFFNGNRHRDQAVEFYRGGAVPLARKLQAIKTELRLFNKLTELQIGLQGYE
KALEFATLAARLSIRVGDQLQELVAFHRLATVYYFLQMYEMAEDCYLKTLALRPPMLQCS
GEALYYCKVYCHLGNLTLHKLKDEQDAAAYFLLALAAATELGDTELQSLIGAKLADIPRA
PRRLVDVPGCATYRARWLSEGGHVV
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaacagtgaagtagcagccagcacagctgggagcaaacacacttctcctctc
acccacgggagcccttactccgtccatttggcctgctcagtgaggaaccccatcatgcct
ggtcgcactgctggcagcaccagcatgagcagtgccccacctgccccctccttcacctta
gctgcccctgagatgccaggagatcccttaggctgggagcatcccttcagggctctgaat
gcttctccccaccgcccctctttcccagctgaggagtgtgagtcctgctgcccccgctca
cccctgctcccaccacactgggaccaactgcagcacagcacagccgagcaccggggacga
tggtggtgggagaagaccatggcatcaggcaaggcaggcacgtcagagccaagcagccca
gctgaggcagcagaagggaccccagacccctcttcagtgctgctggcggctggggagggc
tttccaccagagatctcactcttcttctccattgagagccgctcctcacggtgccccaat
gcccagctgcaggaagcagccagaaggaagctgtgggccttggagaatgatgacagagat
gtctgcgctctgttcaaggagctgtcagccaggctgctgtgcatacaggcacaggaagat
cggttcctcctcaccttcaaaaccctggaagaagtctggaagttttctacgtatctaact
ttaggctatgtaggccactgcttggagcagcttctctttgagcaggagtactggctgaac
tgtgctctggtggaggacacagaggtcacagtgtccatggatgaaaatcgcttggccacc
atatatctgggtctgctgctccaggaaggtcacttttattccagagcagtgcccagtgcg
tgccagtcagagggggagggacaggaaggtctgcagctctgcaggaatgagcttgtccat
gtgaagaacattggagaggaatccaaatgggaagcgatatccttgctgacaggccagcga
ggtctggtacctgtggctgccctagagccagtacctcacccattctaccaatggtttctg
aagaattacgccatgagttttggtatctcccaggagatcagtgggacaacctctcaactg
attgtcaaaggcaaatgcacagccacagcggaccacagaggagcagcatgggatgaactg
agtttctccaagggagacagcatagaagtcatcggcttcctccttccaggactcccgtgg
tttgtgggcaaatctctaagcaatgggaacatcggcttcgtcccagtgcgatctgtaaat
gctgaggcttgtgaacctctggaaaagggattggtgtttctgagcgaagaagaaaacttg
ctcctcctgagcatcccctgcaatggtggtgagcagcactttgccaccctcctcagagag
ctggctcgcactgacatcacctctgtgtaccgcctggatggttttgaacccacagccgca
ttcccgaaagcaccatcagaggctgttctccgtggctgtaaggacacacagctactcgag
tcctgggaggagataaacagcttggtcacagccagcacctcagagcagtccagcccaggg
agtgagtcagcccctgctacatgggaagatgttctcctggacaagctgaatgattttgat
gatcccaagttcttcattgacctgaatgctggacacatggaagatgctgatgtctttgaa
cctatactgaccttccttaaccaagacagttatatgccctgttttcaaagcctctacgat
ctcagtttctcctttctcaactccactttttacggtttctctgatgaggatgaactggtc
ttgtacctcgagacatccaggaactgggccaagaggactcattcagtttgggcccatgtc
aggctctgtttcctcttgggtaagctctgtatgaaaaaagtcaagttctcccaggctcga
gtctattttgaggaagccatgagcaccctggacaggggccttgaggacctgcccctgctg
gctgccttgcacgtgaaccttgcttccatctacctgaaacagaacatgaaaaacaagttc
tcttcattgctgggaaaaatggtggccttgcttgtctgcttgcccagccgctccttcagc
tctgagcatgagctgagggtgatgatgtacgtcctaagagaggccattgctgtggggaat
gctccactggaagcacgagtctgcttcctcattgtcaagctctttctccagctgggaaaa
aatgatgaagtgctgccctttattgagcatcttcagtgtctctgcaccatcttattcaga
caggacactagagctgtgccactggatgccacccccatcctgagctatttgtatgacaag
aagtgcttgccaagcattgcacttgcctctgccaggtcttttgttcccagtggcatcaaa
gggacaccaacacccatttggaaagctggcttcatccttcaaaatatgtccaagctcctg
ggaaaccagctggagaggagcagcatcccagccctggcgtgttcctacctcaagcaggca
ctgcacttctcttgtgagggcagagcagtgaccactcagaggagtctgagcatcattttg
tcccggctgtaccttcagcatggtgtgctggatggggcagtgtgctatgcagcccaggct
gtggccttcagcaggttgataggcgaggaggaggctttcgagtcctccctctctctgggg
tggatgtaccttctgagcagccagccaggcccagcagcagacatcatggggcagctctta
cattccctgcacgggacagacagtgtgacgcagggtggagtggtgcacaacctccttgcc
attgcccttaaaggagcagggcaggtgcagaaggccgcagaaaactacctccaggcactg
cacaaagccaaggagactgggaacaagaggaaccaggctattgccctggccaacctgggg
cagctgagccagtcgcggggggcgagtcagctgtctgagctctacctgctgcaggctgcc
cagctgtatgctgagctgcagggcagtgaggagctggagctggagttggtgtatgtgctg
ctgtggctggcacaggccatggtcagcaggcggaggatggaagatggcaaactctgttat
gaacttgcgctggtttttgccctgaagtggcataatatgaggagtcagcttcacgtcact
gaggctctttgccatttctacagccaagtgtgccccagcctccaagcctgtattacctac
catgagcaccgggtctccttggcacagaaactccaggacagagagctggaaggcaatgtc
cggcagaccctcagccagctctaccaggctttgggcacccctgaggctttgagactgtca
ctggactgcaccaaacagagtctgaggatcttcattgacctcgaggacactggcaaggca
gcagaggcctggctgcaggcaggaaggctgtactatctcatgcaggaagatgagctggtg
gatatgtactttcaggcagctattgagactgctctgaaagctgagaacttctccttggcc
atggatctctatgaaaaagcaggagataacttttttaatggcaaccgacacagagatcaa
gcagtggagttttacaggggtggggcagtgcccttggccaggaagctacaggccattaag
acagagctgcggctgttcaataagctgacggagcttcagatcgggctgcagggctatgag
aaggcgctggagtttgccacgctggcagccaggctgagcatcagggtgggagatcaattg
caagagctggttgcattccatcgcctggctacagtctactattttctacagatgtatgag
atggctgaagattgctacctgaagacactcgccctgcgtccccccatgctgcagtgctct
ggagaagccctgtactactgcaaggtgtattgccaccttggcaacctgaccctgcataag
ctgaaggatgaacaggacgcagcagcctacttcctcttggccctcgctgcagccactgag
ctgggagacacggagctgcagagcctcattggtgccaagctggccgacatccccagagcc
ccacggcgacttgtggacgtgccgggctgtgccacgtaccgggccaggtggctgagtgaa
ggaggccacgttgtctga
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