Coturnix japonica (Japanese quail): 107320618
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Entry
107320618 CDS
T04297
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107320618 (RAI1)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107320618 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
107320618
NCBI-ProteinID:
XP_015732126
LinkDB
All DBs
Position
14:4871987..4931873
Genome browser
AA seq
1890 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAAEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQAWGGQPPALPK
YEDSLMKKTSPAAGGRPYHEPAAAPLPFRTHFPQQQPQQPPALPYPKLQRQKLPNDISSP
MPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLERPLGSAASLAPG
PRVPNLHGYQPNRIGYEQPPQPPPQPPPQPPQPPQPPQPQPQPLQGRHHAPESLHYQNLA
KYQHYNQAGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPSPLMPNLE
NFQYSQQPLNAGAFPAGIADHSHFMPLLNPSPTDGTSPDAQSGNCKNLPKEKLPENLLSD
LSLQSLTALTSQVENISNTVQQLLLSKSAVPQKKGIKTPARTPEQLKGQHCSPESSTYSA
EQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCNQNRSPARVNSNSKAKPES
VSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQEELASEII
VLQDAISEKEEKAWANSPMLTKEATKSPFQLENHRPCLDSMVKGSWPSQGDSSTLTEPLK
LDKASGGSTGKDFGEEVYEGPQVEFAATETKDTLKDAESLAFNSKPSIPASTSSAGASGF
SCYSNTTANSVDSENAMENFEWPEENLGEACLRWKELGSSLQASDLPKSLFPSKLGGSCK
EKKNACSLDLCDGEQPAKSETTRDFGQQAMEEEEEETLTYDEATKVDSERWLQDTRHCCT
AGDFSEIPMISSPELKESDLEVEEYSSLCELAGTEQKSVPYTASPPKPPEIPAVLSASEV
PMSAEETVSTVEKESSVPSTRLSGQSIILLGPAVGTETKVKSWFKSSLPHIQPEEESGGV
EKSHPEAVDSEPALSLGVKKQPAPENALVKTEPVSRGKNLRNKRIHCRLPEDSAGNTVPS
PFNELPVLCVGLDGQGEMLSKNVHSQTPRFAAEGLPARMCTRSFTALTEPRAPAPLEGLK
APMHQEKLGKKPACGVKQRVAFKARKRSGRPAPKVIQSAGGDATITVPGLVPAEDVVGPS
PMDGDVADGGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKAPKKLISNNHLP
PTFKLTPPGSPHKEGKVGTRMKLPKAGPGVGGKMSERPLHSLKRKSTFISPIPAKKRNLV
LRSNSGGVKEEKPEGPHSLFKKMPVAKKVKAKLPPKSPGEAIPKPLPVKEAPDVCIKITS
RAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTCKTAAAATVAATYGTSLSAAG
TERERVVKHGTVAPAVGDARLPKPAAAQKAPAVPSAEQFCRNPHGRALKGKPGGGKKLSA
DGLQNEGCLPAAGAQPGSAVVAKNMALLPKKRNRKGKAAALGMTKAPLGPTLPLQPRERA
AGLGGGDEGKKPKSEEKEAAGGEGPAAGGTARGAKPRANHANYNGYSKRQRKRLGHSKAK
AVPVRCKSRGKRRRPAQQAPLPDPAEPEIRLKYISCKRLRADSRAPPFAPYVHVERRGDF
TTTCTVINSPGDEARLQRGPSGTVPRPRAALPASSAMHLGPVVSKALSAACLVCCLCRSP
ANYKDLGDLCGPYYPEDCLPKKKSRLKEKARVEGEEGSTAERPRGVAESSWAAGSRTGRT
EGAAEPGKPSVLRSSPRGVFRRLQSCYCCDERTEGEEAAEKPRRHECTKAESPPQPEPAG
DTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLKCSSCQQAGATVGCCQKGCPHT
YHYACAVDTGCLLTEESFSLRCPKHKRQPV
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcaactgccatacgcaggc
tacgagaacagcgccgcggagaaataccaccggggaaacaagcaattagcagggcagcag
ctgcaaggcagaccggccttttccaattacgccgtgcaggagaacagcccctacccggca
cgctattcgggggacgagagcctgcaggcgtggggtgggcagccgccggcgctgcccaag
tatgaggacagcctgatgaagaagacgtcgccggcagcaggagggcggccataccacgag
ccagcagcagctccattgcccttccggactcacttcccgcagcagcagccgcagcagccg
cccgcgctgccctaccccaagcttcagcggcagaagctgcccaacgacatctcttcgccc
atgcccttctcacagagcccccatttcgggcagcactcacagtccttccctgcctcctcc
acctactcctctgtgccggggggcagccagccggcacattcctacaagagctgcacggca
ccttcagggcagccaccgctggagcggcccctgggtagtgctgccagcctggcccccggc
ccccgtgtgcccaacctgcatggctaccagcccaaccgcatcggctacgagcagccccca
cagccacccccacagccgccaccgcagcccccacagcccccgcagcctccccagccccaa
cctcagcccttgcaggggaggcatcacgccccagagagcctccactaccaaaacttggcc
aagtatcagcattacaaccaagcggggcagacctactgccagggtgatgcaccgcctgtc
cgcacgccagagcagtactaccaaaccttcagccccagtgccagccactcgccggcacgc
tctgttggtcgctccccgtcctacagctccacaccatccccactgatgcccaacttggaa
aacttccagtacagccagcagccactcaatgctggtgccttcccggccggcatcgctgac
cacagccatttcatgccgctactcaacccttctcccactgacgggacgagcccagatgct
caatctgggaactgcaaaaatttgccgaaggagaaactgccagaaaaccttctgtcagac
ctgagcctgcagagcctgacggcactcacctcccaggtggagaacatctccaacaccgtc
cagcagctgctgctttctaaatcggccgtgccccagaaaaagggcatcaagaccccagcg
aggacccctgagcagctcaaggggcagcactgcagcccggagagcagcacgtattctgca
gagcaggtggggaccccgctgtcggacccgctcagcaccccacagtccgtccatgctgag
acacaggatgccgactatctgagtggttcggaggaccagctggagaggagcttcctgtac
tgcaaccagaaccgcagccctgcccgcgtcaacagcaactccaaggcgaagcctgagtcg
gtgtccacatgttctgtcacctccccagatgatatgtccaccaaatcggatgactctttt
cagagcatccacgccagcctgcccctggagaccttcaccaagtacgtgaccaacgagagg
gactgtccccggctgctgctcagcgcgctgtcccaggaggagctggcctctgagatcatc
gtcctgcaggatgccatcagtgagaaggaggaaaaagcctgggccaactcacccatgttg
accaaggaggccacaaaatcccccttccagctggagaaccaccggccgtgcttggactct
atggtgaagggctcatggcccagccaaggtgactccagcaccctcaccgagcccctcaaa
ctggacaaggcttcagggggcagcacggggaaggactttggggaggaggtgtatgagggt
ccccaggtggagtttgcagccactgagaccaaggacacgcttaaggatgcggagtcgttg
gctttcaactccaagcccagcatcccagcttctacttccagtgcaggggcctccggcttc
agctgctattcaaacaccacagccaactcagtggactctgaaaatgccatggagaacttt
gagtggccagaggagaatctgggtgaggcgtgcctcaggtggaaggagctgggctcaagc
ctgcaagcctccgacctccccaaaagcctcttccccagcaaactgggaggatcctgcaag
gagaaaaaaaatgcttgtagcttggacctgtgcgatggtgagcagccagctaagagtgag
accacccgggactttggccagcaggcgatggaggaggaagaggaggaaacactgacctat
gatgaggccacaaaggtggacagtgagaggtggcttcaggacacgcggcactgctgcaca
gctggggactttagtgagatccccatgatctcatcaccagagctgaaggagtcggacctt
gaggtggaggagtactcctcgctctgtgagctggcaggcacggagcagaagtcggtgccc
tacactgcctcacctcccaagccccccgagatacccgctgtgctgtctgccagcgaggtg
cccatgtctgctgaggagactgtcagcacggtagagaaggagagctctgtgccctcaacg
cgtctctctggtcagtccatcattctgctgggcccggcagtgggcacagagaccaaggtg
aagagctggttcaaatcctccctgccccacatccagcctgaggaggagagtggtggagta
gagaagtcccacccggaagcagtggactctgaacctgctttgtcacttggggtgaagaag
caaccagcacctgaaaatgcattggtgaaaacagagcctgtctcacggggcaagaacctc
cgcaacaagaggatccactgccggctgccggaggacagtgctggcaacacagtgccgagc
cccttcaatgagctgccagtgctgtgtgtggggctggatggacagggggagatgctgagc
aagaatgtgcacagccagacacccaggtttgcagcagagggcttgccggcacgcatgtgc
acccgctccttcactgccctcactgagccccgtgccccagcccctctggaggggctgaag
gctccaatgcaccaggagaagctgggcaagaagccagcgtgtggtgtgaagcagcgggtg
gctttcaaagccaggaagcgcagcggccggccagcccctaaggtcatccaaagtgccggt
ggtgatgccactatcacagtgcctggcttggtgccagctgaagatgtggtggggccgagc
ccgatggatggggatgtggcagacggtggggagagggaccagcgctcgatgatcctgcgc
tcacggacaaagacacaggaggttttctacaccaagaggcggcggggcaagcgggcagct
gatgtccgactgaagaactgcaaagcacccaaaaagctcatctccaacaaccacctccca
cccaccttcaagttgacccccccaggcagcccccacaaggagggcaaggtgggcaccagg
atgaagctgcccaaggcggggccaggggtgggcggcaagatgtcggagcggcccctgcac
tcactgaagaggaagtccaccttcatctcccccatccctgccaagaagaggaatctcgtc
ctgcgcagcaacagcggcggcgtgaaggaggaaaagccggaaggtccccacagcctcttc
aaaaagatgcctgtggccaagaaggtgaaagcaaagctgccccccaagagccctggcgaa
gccatccccaagcccctcccggtgaaggaggcccccgacgtctgcatcaagatcacctcg
cgggcagcattccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgcggc
ctcaagctggaggccatcgtgcagaagatcacctcacccaacctgaagaagttcacctgc
aaaacggcggcggcagccacggtggcggccacctacggcacctcgctgagcgcagcgggg
acggagcgtgagcgggtggtgaagcacggcaccgtggccccggcagtgggtgatgcacgg
ttgcccaaaccagcagcagcacagaaggcacccgctgtgccatcggctgagcagttctgc
cggaacccccacggccgagcactgaaagggaagccgggcggtgggaagaagctctctgcc
gatggcttgcagaatgagggctgcctgccggctgcgggggcacagcccggctcagctgtg
gtggccaagaacatggcgctgctgcccaagaagaggaaccgcaagggcaaagcggcggcg
ctgggcatgaccaaggcacccctcggccccacgctgcccctgcagccccgtgagcgcgcc
gccgggctgggtggtggggacgaaggcaagaaaccaaagagcgaggagaaggaggcggcg
ggcggcgaggggccggcggcaggtgggacggcacggggggcaaagccacgggccaaccat
gccaactacaacggctactccaagcggcagcgcaaacgtctgggccacagcaaggccaaa
gcagtgccggtgcgctgcaagagccggggcaagcggcggcggccggcccagcaagcccca
ttgccagaccctgctgaaccagagatccgcctcaagtacatctcctgcaagcggctgcgg
gctgacagccgggcacccccctttgctccctacgtccacgtagagcggcgtggtgacttc
accaccacctgcaccgtcatcaactctcccggtgacgaggcccggctgcagcggggaccc
tccggcaccgtgcccaggccacgggcagctctgccggcctcctccgccatgcacctgggg
cccgtggtgtccaaggcgctgagcgcggcctgcttggtgtgctgcctgtgccgcagcccc
gccaactacaaggacctgggcgacctgtgcgggccctactaccctgaggactgtctgccc
aaaaagaagtcgcggctgaaggagaaagcgcgggtggagggtgaggagggcagcacagcg
gagagaccccgaggggtggcagagagcagctgggcagctggaagcaggacgggcaggacg
gagggtgccgcagagccgggcaagccaagcgtgctgcgctccagcccccgcggtgtgttc
cgaaggctgcagagctgctactgctgtgacgagaggacagagggcgaggaggcagccgaa
aagccccggcggcacgaatgtaccaaggctgagtccccgccgcagcccgagccggcgggc
gacacgcaggagcactggctgcacgaggcctgtgccgtatggaccgctggggtgttcctg
gtggcggggaagctctacgggctgcaggaggccgtcaaggcagctgctgacctgaagtgc
tcaagctgccagcaagctggagccaccgtgggctgctgccagaaggggtgtccccacact
taccactacgcgtgtgccgtcgacacaggttgcttattaactgaagagagcttctctctg
agatgtcccaaacataagagacagccggtgtag
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