Coturnix japonica (Japanese quail): 107320854
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Entry
107320854 CDS
T04297
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107320854 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cjo01001
]
107320854 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cjo04054
]
107320854 (CIITA)
Enzymes [BR:
cjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107320854 (CIITA)
Protein kinases [BR:
cjo01001
]
Serine/threonine kinases: Other
TAF1 family
107320854 (CIITA)
Pattern recognition receptors [BR:
cjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107320854 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_9
LRR_8
NB-ARC
LRR_14
RsgA_GTPase
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107320854
NCBI-ProteinID:
XP_015732587
LinkDB
All DBs
Position
14:complement(8660833..8690150)
Genome browser
AA seq
1123 aa
AA seq
DB search
MSLSRFYLCQDDNKRQIMDSASVPENGYLDLLLCDIDPVHLFTFSDPKSSGNEVEFFADP
EIDTCNYEQFNNMDFLCTVENEENEDELYLSSSARDAYARIAELAEYVLKDPHEKQVEDA
FAGSLILDEMALENTEKFTDVKMQKCHKRSSAENCSDASEPKYKKIVDAPAVPTGNGCFL
TMSPFSHSSDCTSLTHQHMSFSVPAINALGSFVIPGSSVPFIPECLPLSMKDNRENIDFV
DPAQQKINHFLGNGTSNAIKYPALNSSSELMVSPSFQVNLNGLEMFKEAQVPVILSEETS
RRPRSVEAFCTSLMDYFRDVCKSVSVEREMSLDHMYVDGTLRQSQIETKPGKNSVKSAEK
DSVTYSEQGKEKTVLERDQIFEIPGGKELETKVIVVLGKAGMGKSILVQKICQDWSNGEF
PQFEFVFWFDCKQISLPEKWYSLKDLLLDFFVKPQEGSKEIFEYILQNSTKVLLVFDGLE
GLHGHENFPHCAASHPIKDLCRVKELLSGLTQKKILNGCTLLLTARTKEKVCQYVSKVDK
TIEIVGFSPWQRELYITKYFEGLSSCNNALDLIKESEYLFSHCYSPVMCRFVCFLCETIL
EMGDQGLPSTLTTLFLKFVQQKITPTQKDVTDVTLAHSQENLALLACIAWCLEEKQQSAM
KSDLLPSMKVKEFALKNGFFLPFAFPRHSGTGEEEYGTMFSDFVIQNFLGALHLILAEGI
KDKSLIKYLSFPSKKKKPYDWLHLVPRFLAGLLFLQDDTYFCSLLNKGVKKSTKKQKMLL
KYIKRLQINNLCPERLLGLLHCIYETQSDYLLQHVALRLRPDLSFLGVVLTPPDVHVLSS
TLERSRKEFSLDLQNSSIDIHGLKNLVGLKNVTSFRASLSDTIRLWKYLEQTKDYELLRT
STEKFVLDPFKAKTMKDISDLSDLVEVQKLIINCVQDASGCSSYEIPAIKNLKKLEFALG
PACGLQGFLKLVEILASFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQN
KITDVGAEKLATALPYLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITG
VGAQQLTDSLKKCPHIKNIVMWNPTIPYGVLEHLQQLDSRISV
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgagccttagcagattttacctgtgtcaagatgacaacaagagacaaatcatggattca
gcatctgtgcctgaaaatggctatcttgatttgctgctttgtgatattgatccagtgcat
ctatttacattctcagatcctaagtcatctggaaatgaagtcgaattttttgcagatcct
gaaattgatacctgcaactatgaacaatttaataatatggatttcctgtgtacggtggaa
aatgaagaaaatgaggatgaattgtatctctcttccagtgccagagatgcttatgctaga
atagctgaattagcagaatatgtactcaaggatccgcatgagaagcaggtggaagatgct
tttgcagggagccttattttggatgaaatggctcttgaaaacactgagaaattcactgac
gtaaagatgcagaaatgtcacaaaagaagctctgcagagaattgctctgatgcttcagaa
cctaaatacaagaaaattgtggatgcccctgcagtaccaacagggaatggatgtttcctt
acgatgtctccattcagccattcatctgactgcacctcactaactcaccagcacatgtcc
ttttcagttcctgctatcaatgcactgggaagttttgtaattcctgggtcttcagtacct
ttcattccagagtgtctgccacttagcatgaaagacaacagagagaacatagactttgtg
gatcctgctcagcagaaaattaatcattttcttggaaatggcacatctaatgctataaaa
tatccagcactgaattcctcctctgaattaatggtatccccaagttttcaagttaattta
aatggcttagaaatgttcaaagaagcccaagttccagtaattctttctgaagaaacttca
agaagaccaaggtcggtggaagctttttgtacatcgcttatggattacttccgagatgta
tgcaaatctgtgtctgtggagcgtgaaatgtctcttgatcacatgtatgttgatggtaca
cttaggcaaagccaaattgaaaccaagcctgggaagaacagtgtaaaatcagcggaaaag
gattcggtaacttacagtgagcaagggaaggaaaagacagtccttgaaagagaccaaata
tttgaaatcccaggaggcaaagagttagagactaaagtgattgtggtgctgggaaaagca
ggaatgggcaaaagcattcttgttcagaagatctgccaggactggtccaacggcgagttt
cctcagtttgaatttgtcttttggtttgactgcaaacaaataagtttgcctgagaagtgg
tacagcttgaaggatctacttcttgatttttttgtaaaacctcaggagggaagcaaagag
atcttcgagtacatacttcaaaattctactaaggtccttctggtttttgatggtttggaa
gggttgcatggccatgagaattttcctcattgtgcagccagccaccctatcaaagacttg
tgccgcgtgaaggagctgctttcaggtctcacccaaaagaagatactcaatggctgtacg
ttattacttacagcaagaacaaaagaaaaggtgtgccagtatgtgtccaaagtggataag
actattgaaatagtaggattttccccttggcagagagaactgtacataaccaaatatttt
gaaggattatcctcatgcaataatgcactggatttaatcaaggagtctgagtacctcttc
agtcattgttacagccctgttatgtgtagatttgtttgttttctctgtgagacaatactt
gaaatgggagaccaaggccttccttcaactcttactacactcttcctgaaatttgttcag
caaaaaataacgcctacacagaaagatgttacagatgttacacttgcacacagtcaagag
aatcttgctttgctcgcctgtattgcctggtgtcttgaagaaaagcaacaaagtgccatg
aagagtgatcttcttccttctatgaaagttaaagagtttgctctgaagaacggatttttc
ctgccatttgcattccccagacattcaggtacaggagaagaggaatatgggactatgttc
tctgattttgtcattcagaatttcttgggtgcacttcaccttatactagcagaaggcatc
aaggacaaaagtctaataaagtacctgtcttttccatccaaaaagaagaaaccttatgac
tggttacatttagtgcctcggtttttggctgggctgttattcctccaggatgacacttac
ttctgctcccttttaaacaaaggtgtaaaaaaatcaaccaagaagcagaaaatgctgctg
aaatatattaaaaggttgcaaataaacaacctctgcccagagaggttacttgggcttttg
cactgtatttatgaaacacaaagtgattatctcctgcagcacgtggccttaagactcagg
ccagacttatcctttctgggcgttgttcttacaccacctgatgtccatgttctgtcctct
actttggaaaggtcaagaaaagaattttccttggatttgcaaaacagcagtattgacata
catgggctaaaaaacttggttggcctgaagaatgtgacatcattcagagcctccctcagt
gatacaatcaggctgtggaaatatttagaacagacaaaagactatgaactgctaagaaca
tcaacagaaaaatttgttcttgatccctttaaggcaaagacaatgaaagacatcagtgac
ctctctgaccttgtagaagtgcagaagttaataatcaactgtgtgcaagatgcctctggt
tgcagcagttatgaaattcctgccataaaaaatctgaaaaaactagaatttgctctgggt
cctgcgtgtggccttcagggattcctaaaactcgtggaaattcttgcatcatttccatca
ctgcagcatttagaccttgatgctctgagtgaaaatggtataggagatgaaggagcaaag
agtctgtctgaagtttttccaacactgacgtcactggaaacattaaacttgtcacagaat
aagataacagatgtgggcgcggagaaactagctacagctctgccctacttgtcttcatta
acaacactaagcttatacaataatagcatttgtgatttcggagcggaaaaccttgcaaaa
gtccttcctgcaatggcttccttaagagtgctagacattcagtataacaaaataactggt
gttggagcccaacagctgactgacagcctaaaaaaatgtccccatataaaaaatatagtg
atgtggaatcctacaattccatatggagttcttgaacaccttcagcagctggactctagg
atcagtgtgtag
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