Coturnix japonica (Japanese quail): 107320917
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Entry
107320917 CDS
T04297
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjo03037
]
107320917 (IFT140)
Cilium and associated proteins [BR:
cjo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
107320917 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_Prp19
TPR_IFT80_172
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
TPR_GEMI5
TPR_COPA_B
RNase_HII
WDR54
WD40
Beta-prop_WDR35_TULP_N
Consortin_N
EIF3I
WD40_MABP1-WDR62_2nd
Clathrin
PhoU
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
107320917
NCBI-ProteinID:
XP_015732731
LinkDB
All DBs
Position
14:11956445..11992741
Genome browser
AA seq
1451 aa
AA seq
DB search
MAVYVDHRTEAPDSVASPCVISWHSVQPLLAVASISTASGGCVDIYLEQGEHVPDAHIER
SSQVTSLSWQPCRLILAAGWDNGEVVVLNKHDKELHAAPTNHSARITVLNWSSSGSRLVS
GDGHGILFLWRMDQRGRVQGPPLLKHEYGQCVSHCIFRPPPPGEDFLQLAKAAVSGDEKA
LDMFNWRKAGTEAPLKMGLQEGLSFFITLTDGSVHYVNEKGKTNHVLSADNRVQKLLFME
KKDALVVITENLLLSLHTITLEGDAKELMKVKLSGKTGNSADIILIDHSLVVTAMGETVL
RFWDLDRGENYVLSPDVQFGFEAGECMNCVSYCSAKGLLAAGTNKGRVAMWRNTSVSSQS
TGEGKEKWKLHASTELEGNITQIKWGSRKNLLAVNSISSVVILSEQAMSCHYNQQVAAVQ
VSPSLFNVTFFSTGTTHNLHVDMTVNGVFTTKDAVVFWNGKQVTVFECSEDTLRNAGSFL
CDSPVLSMHGENLYTVEPNRVQVRTWQGTVKQLLVFSEAEGNPCLLDVCGNFLAVGTDLS
HFKIFDLSRREAKVHCNSKNFSELFPGLGNIASVKCNASGNKVSILVSKADGGTDSKICF
YDVEMDKVTVFDFKAEQGIGREKLSSGSGIDRPVVEHPELHNHVPVCHFWDCNEPRLFVC
ETILEPGARSPSQKSNQTESTLDVWVVSFFSTEEHGLLLQDSFPLPSLYEVLLGVDVPHY
YFAKKPGEAGKGQAESGSTVLQMASRRPMRDFIGLGDCDKATRDAMLNFSFYLTAGDMDE
AFKSIKLIKSEAVWENMARMCVKTQRLDVAKICLGNMGHARGARALREAEQEPEQEARVA
VLAVQLGMLEDAEQLYKACKRYDLLNKFYQATNQWQKAIETAEAHDRVHLRTTYYSYAKH
LEAVGDHALALSHYEKSDTHRFEVPRMLSDDLQALENYVNKMKDKSLWKWWAQYLESQSD
LESALQYYALAQDYFSLVRVHCFQGNIQKAAEIANETGNWAASYHLARQYESQDEIKQAV
HFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAACYYEEKGEQMDRAVMLYHK
AGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLARCSDFFIEHAQYEKAVELLLTAK
KYHEALQLCLKQNLTITEEMAERMTVCKDSKDLSEESRRELLEQIADCCMRQGNYHMATK
KYTQAGNKLKAMKALLRSGDTEKIVFFAGVSRQREIYIMAANYLQSLDWRKDPEIMKNII
SFYTKGRALDLLAGFYDVCAQVEIDEYQNYEKAQGALTEAYKCLSKAKTKSPLEQESKLA
HLQSKMALIKRFIHARRVYSEDPKEAIRQCELLLAEQDLDSTIRQGDILGFLVEHYLQVQ
EFHVAYQYLEQMRKIIPCTNLTYYIKQQTIEAVHRGAGIPISQALVPEQSQYSDVENKDV
EEEVVDEVEGP
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtacgtggatcaccgaacggaggctccggattcagtcgcgtccccttgtgtt
atatcgtggcactccgttcagcccctcctggcagtcgcttctatcagcacagcatcggga
ggctgcgtggacatctacctggagcagggagaacacgttcctgacgctcacatcgagagg
agctcccaggtcacgtcgctgtcctggcagccctgcaggctgatcctggcggctgggtgg
gacaatggagaagttgttgtacttaacaaacacgacaaggagcttcacgctgcgccgaca
aaccacagcgccaggatcaccgtcctgaactggagcagcagcggatcccgcctggtgtct
ggggatgggcacggcatcttgtttctatggagaatggatcagcgaggtcgagtgcaaggc
cctcccttgctgaaacatgagtatggacaatgtgtgtcacactgcatcttccgaccaccc
cctcctggagaagacttcctacagctggcaaaagctgctgtgagcggtgatgagaaagcc
ttggatatgtttaactggagaaaagctggaacagaagcacctctgaaaatgggactccag
gaaggactgtccttctttatcaccttgactgacggttctgtgcactacgtgaatgagaaa
ggaaagacaaaccacgtattgtcagccgacaaccgtgtacagaagcttctgttcatggag
aaaaaagatgcgttagttgtgataacagagaacctgctgctgtccttgcatacaattact
ctcgagggagatgccaaggagctcatgaaggtgaagttgagtgggaagactggtaattct
gcagacatcattttaatagaccatagccttgttgttacagcaatgggtgagacggtactc
aggttctgggatttggaccgaggtgagaactatgtgctctccccagatgtgcagtttggc
tttgaggctggggagtgtatgaactgtgtttcttactgcagtgctaaaggtctcctagca
gctggtactaacaaagggagagtggccatgtggaggaacacgtcagtatccagtcagagc
acaggggagggcaaggagaagtggaaactccacgcatctacagaacttgaaggaaatatc
actcagataaagtggggctcgcgaaagaacctcctggcagtgaacagcatcagctctgtg
gtcatcctcagtgagcaggccatgtcatgtcactacaatcagcaagtggctgctgtgcag
gtgtctcccagcctgtttaatgtgaccttcttcagcacaggaaccacacacaatcttcat
gttgatatgactgtgaacggagtcttcactactaaggatgctgtggtgttctggaatggg
aagcaagttactgtctttgagtgctcagaagataccttaagaaatgcaggctctttcctt
tgtgactctccagttctgtcgatgcatggagaaaatctgtacacggttgagccgaatcgg
gtccaagtccgtacctggcagggaacagttaaacagcttctggtgttttctgaagcagag
gggaatccgtgtctcttggatgtctgtgggaacttcttggctgtgggaaccgatttgtct
cactttaaaatctttgatctctctcgcagagaggcaaaagtgcactgcaatagtaagaat
ttctccgagctgtttcctggccttggaaatattgcatctgtcaagtgcaatgctagcggc
aataaagtcagcatccttgtcagcaaggcagacgggggcactgattccaagatctgtttc
tatgacgttgaaatggacaaagttacagtgtttgatttcaaagctgagcaaggaattggt
agggaaaagctttcttctgggagtggtattgacaggcctgttgtggagcatccagagctg
cacaatcacgtccctgtttgccatttctgggactgcaatgaaccgagactttttgtatgt
gagacaattctggagccaggtgcacgatccccaagtcagaagagcaaccagactgagagc
acgctggatgtttgggtcgtgtcattcttcagtactgaagaacacggccttttgcttcag
gacagcttcccactgccatcactgtacgaggttcttctgggtgtcgatgtaccacattat
tactttgcaaaaaagccaggggaagctgggaaaggacaagcggagtcaggctccacggtc
ttgcagatggcttccagacgacccatgagagatttcattggattaggagactgtgataag
gctacccgggatgccatgctgaacttcagcttctatctgactgctggagacatggatgag
gcgttcaaatccatcaagctgataaaaagtgaggctgtctgggagaacatggctcgcatg
tgtgtgaagactcagagacttgatgttgccaaaatttgcctcggaaacatgggtcatgcc
agaggagccagagcattaagggaggcagaacaggaacctgagcaggaagccagagtggct
gtgctggcagttcagctgggcatgctggaggatgcagagcaactgtacaaggcttgcaag
cgctacgaccttctgaataagttctatcaggccacaaaccagtggcaaaaagccattgaa
acagccgaggctcatgaccgggttcacctgcgcaccacttactacagctacgccaagcac
ctggaggcagtgggggatcacgctcttgcactcagccactatgagaagtcagatacacac
aggtttgaggtaccccgaatgctgtctgatgacctacaggctctggagaactacgtcaac
aagatgaaagacaagagcctgtggaaatggtgggcacaatacctggagagccagtcagat
ttggaatctgcattacaatactatgcactggctcaggattatttttccctagtccgtgtc
cactgttttcagggcaacattcagaaggctgctgaaatagcaaatgaaacaggaaactgg
gcggcttcgtaccacttggcccgtcagtacgagagtcaggatgaaatcaagcaggccgtg
cacttctacaccagggcccaggcatttaacaacgccattcgcctgtgtaaggagaacaat
ttagatgatcagctgatgaacctggctctcctgagctctccagaagacatgatagaggca
gcctgctattatgaggagaagggggagcaaatggaccgagctgtcatgttgtaccacaag
gcaggacacttctccaaagcactggagctggcctttgccacgcagcagtttggagcctta
cagctcattgctgaagacctcgatgagaagtcagacccagctctgctggctcgctgctct
gatttttttattgaacatgctcagtatgagaaggcagtggagctgctgctcacagccaaa
aagtaccatgaagctctgcagctttgcctgaagcagaacctgaccatcacagaggagatg
gctgagcggatgacggtctgcaaggactccaaggacctttctgaggagtcccggagggaa
ctcctggagcaaatagcagattgctgcatgagacaaggcaactaccacatggcaaccaag
aagtacacgcaagctggaaacaagttaaaggctatgaaggcactgctgagatctggagac
acagagaaaatcgtcttctttgcgggagtctccagacagagagagatttacatcatggca
gccaactacctgcagtcactggattggcgtaaagacccagagattatgaagaacatcatc
agcttctataccaaagggagagccctggatctgttggcgggattctatgatgtgtgcgct
caggtggaaattgatgagtatcagaattatgagaaagcacagggagcactgacagaagca
tataagtgtctttcaaaagcaaagaccaaaagccctctggaacaggaaagcaaactagca
catctgcaaagcaagatggccctgataaagcgattcatccacgctcggagggtttactct
gaggatcccaaagaagccatcagacagtgcgaactgctcctggctgaacaggaccttgac
agcaccatccggcagggggacatcctgggattcctggttgaacattatttacaggtgcag
gaattccatgtggcttaccagtacctggagcagatgcggaagataattccatgcacaaac
ctgacttactacatcaagcagcagacgattgaggcggttcaccgaggagcaggcattccc
atcagccaggccttggttccagagcaaagtcagtacagcgatgtggagaacaaggatgtg
gaagaagaagtggttgatgaagtggaaggcccctga
DBGET
integrated database retrieval system
