Coturnix japonica (Japanese quail): 107321044
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Entry
107321044 CDS
T04297
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04142
Lysosome
cjo04144
Endocytosis
cjo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107321044
04142 Lysosome
107321044
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107321044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107321044
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjo04147
]
107321044
Membrane trafficking [BR:
cjo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107321044
Exosome [BR:
cjo04147
]
Exosomal proteins
Proteins found in most exosomes
107321044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
107321044
NCBI-ProteinID:
XP_015733026
UniProt:
A0A8C2U7J7
LinkDB
All DBs
Position
15:complement(20506..52901)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDISDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISLNTVA
LVTDNAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPSTGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNALFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGHASPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRTVMRVSPEQGLQFAQMLVQDE
EPLANINQIVDVFMESSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGSEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AVQVLIEYIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSELEEFISSPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGREFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDVELAEKLLQWFLEE
GKQECFTACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDNL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQTNFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccattcgctttcaggagcacttccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacgatggaatcagacaaatttatctgcatc
agggagaaagtaggagagcaggcacaagtagtaataattgacataagtgatccaacaaca
cccatcagacgtccaatttctgctgaaagtgccatcatgaatccagcctctaaagtaatt
gcactaaaagctgggaaaacgcttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccatactatggcagaggaggtgatcttctggaagtggatctctctgaatactgtcgcc
cttgtaacggataatgcagtctaccattggagcatggagggagaatctcagccccaaaag
atgtttgacaggcatgctagtcttgcaggctgccaaatcatcaattatagaactgatgag
catcaaaaatggctgttgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactctgttgataggaaagtctcccaacctatagagggccatgcagcagct
tttgcggagttcaaaatagagggaaatgccaaaccttccaccctcttttgttttgctgtg
aggagtcctgcaggaggcaagcttcacataattgaagtgggtcaaccatctactgggaat
cagccatttgttaagaaagctgttgatgtgttttttccacccgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggtgttatctacctgatcacaaagtatgga
tatattcatatgtatgatttggagtctggagtttgcatctacatgaaccgcattagtgct
gacactattttcgtcacagcttctcatgaacctacctcaggcattattggtgtcaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacattgtgaactatgccacaaac
gttctccagaatcctgacttgggtttgcgtatggctatacgtagtaatcttgctggtgca
gaggaattatttgccagaaagtttaatgcactgtttgctcaaggaagctatgcggatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgacacaatcaggaag
tttcagagtgtgccagctcagccaggccatgcctctcccctgctccagtactttggaata
ttgcttgatcaaggacagctgaacaagtatgagtctctagagctctgtcgacctgttctg
caacaaggccgcaagcagcttctggagaaatggctgaaggaagacaagctggagtgttca
gaggagctgggagacttggtgaagacagctgatccaacccttgcactcagtgtctatctt
cgtgctaatgtgccaaacaaagtgattcagtgctttgctgaaactggtcaattccagaag
atagtactgtatgctaaaaaggttggctataccccagactggatcttcttgctgagaact
gtgatgagagtcagtcctgagcagggcctgcagtttgctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagagcagccttattcag
caatgcacatcctttctgttggatgctttgaaaaataaccgcccagcagaaggccacctt
cagactcgtctgctggaaatgaatttgattcatgccccacaggttgcagatgccatcctt
ggaaaccaaatgtttacacactatgatcgtgctcatattgcccagttatgtgaaaaggca
ggcttgctccagcgagctttggaacactacactgatctttatgatattaaacgtgctgtt
gttcatactcatctcttgaatcctgagtggcttgtgaatttctttggctctctctctgtt
gaagactctgtagaatgcttgcgtgctatgctatcagccaacattaggcaaaacctacag
ctctgtgtacaggttgcttctaagtaccatgagcagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
ttcagccaggatccagatgttcacttcaagtatatccaggcagcttgcaagactggtcag
ataaaggaagtagaaagaatttgccgtgaaagtaactgctataacccagaacgggtgaag
aactttctgaaggaggcaaagctgacagaccagcttcctctgatcattgtctgtgatcga
tttgactttgttcatgacctggtgctctacttataccgcaatagcctgcagaagtatata
gagatctatgtacagaaggtgaaccccagccgcataccagcagtggttggagggcttctt
gatgtggattgttctgaagatgtcattaagaacttgattatggtggttagaggacagttc
tcaacagatgagctggtggctgaagttgaaaaaagaaatcggcttaaactgctgttgccg
tggcttgaatcaaggattcatgaaggctctgaagaacctgcgactcataatgccttggcc
aaaatctacattgacagtaataataatccagagcggtttcttcgtgagaatccatactat
gacagtcgtgtagttggcaaatactgtgaaaagagagaccctcatctggcctgtgttgca
tatgagaggggccagtgtgatctggaactcataaaggtatgcaatgagaactcactattt
aagagtgaggctcgttatctagtacgcaggaaggaccctgaactctgggcaaatgttcta
gaagaaaacaacccattcaggcgccagcttattgaccaggttgtccaaacagctttatca
gagacacaggatcctgaggaggtttctgtcactgtgaaagctttcatgactgcagacctg
ccaaatgaattgattgagttactggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctccagaatctgctgatcctgactgccattaaggctgatcgcactcgtgta
atggaatacattaatcgactggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctgtatgaagaagcctttgctatattcaggaaatttgatgttaatacttca
gcagttcaggtgctgattgagtacattgggaatttagaccgtgcttatgaatttgcagag
agatgtaatgagccagctgtatggagccagcttgccaaagcacagttgcagaaagacttg
gtgaaagaagccattgactcctatataaaggcagatgatccatctgcctacatggaagtt
gttcaagcagcaaatagaaacgataattgggaggacctagtcaagttcttgcagatggcc
aggaagaaggctagagagtcttatgtagagacagaacttatttttgcctttgcaaaaact
aatcgtctctcagaactggaggaatttataagcagccctaataatgcccatatacagcag
gttggtgatcgttgttatgaagagggtatgtatgaagcagcaaaactactctataacaat
gtatctaactttgctcgcttggcatctaccttggtgcaccttggggagtatcaggcagca
gtggacagtggtcgcaaagccaacagcacaaggacttggaaggaggtatgttttgcctgt
gtggatggaagagaattccgcttggcacagatatgtggcttgcatatagtcatccatgct
gatgaacttgaagagctgattagttactatcaggatcgtggctactttgaagaactgatt
gcccttctggaagctgctttgggcctagagcgtgctcacatgggaatgtttactgaactt
gctatcttatactccaaatttaagcctcagaaaatgagggaacatctggagctcttctgg
tcaagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctctatgacaaatacgaggagtatgacaatgcagtaattactatgatgaat
catcctactgatgcctggaaggaaggacagtttaaagacataattgccaaggtggcaaat
gtggagctatattacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatcttctgcttgtattatctccaagactggatcacaccaggacagtcaattttttctca
aaggttaatcagctgcttctagtaaagccttatttgcgttcagtgcagaaccacaataat
aaaggcgttaatgaagctctaaacaaccttttaacagaggaggaggactaccagggtttg
agagcttccattgatgcctatgacaactttgataacataactttggctcaacgtctggaa
aagcatgagctaattgaatttaggcgcattgcagcatacttgtataagggtaacaaccgc
tggaagcagagtgtggaattatgcaagaaagaccatctgtataaggatgctatgcagtat
gccgcagagtccaaagatgtagaactagcagaaaagctgcttcagtggttcctggaagaa
ggcaagcaggagtgttttacagcctgccttttcacgtgttatgacttgctgcacccagat
gtagtccttgaattggcatggaggcataatatcatggacttcgcaatgccttatttcatc
caagtgatgagagagtacctcaccaaagtcgatgggctgttctataaggtggataatctt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacctactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccagacaaacttt
ccgtatggatacacagcaccaggattcacccagccacctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
