Coturnix japonica (Japanese quail): 107321259
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Entry
107321259 CDS
T04297
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjo03009
]
107321259 (DDX54)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107321259 (DDX54)
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
Pre-60S particles
Helicases
107321259 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Acetone_carb_G
Motif
Other DBs
NCBI-GeneID:
107321259
NCBI-ProteinID:
XP_015733484
UniProt:
A0A8C2TRP4
LinkDB
All DBs
Position
15:complement(8796929..8801959)
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AA seq
831 aa
AA seq
DB search
MAPPGSRKRRGPSGAGEKNRAAPAFPVPSLPSFPTAEDDGADAADTAAMVRAQNKKKKSG
GFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILRGRDVVAMARTGSGKTACFLLPMFE
RLKAPSPSGARALILSPTRELALQTLKFTKELGKFTGLKTALVLGGDKMEDQFAALHENP
DIIIATPGRLVHVAVEMNLKLHSVEYVVFDEADRLFEMGFAEQLQEILARLPGSHQTVLF
SATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRNVVKP
QDQTVVFVATKHHTEYLKELLTSQGICCTHIYSSLDQTARKINIAKFAHGKCQVLLVTDV
AARGLDIPMLDNVINYSFPAKSKLFVHRVGRVARAGRSGTAYSLVAPDEMPYIFDLHLFL
GRPLILAGAQEMPADADGVLGRVPQSLVDDEECLLLTDHEGSLELQSLRRVADNAQKQYL
RSRPSPSPESIKRVKEMDTSQLGIHPLFSAHFEDTELERLKLVDSIKAYKSKATIFEINA
TAHTLASSIMRSKRRHDRALIEKFHRGQQEKRAAALEGQRLHPVTPATPRPEEEEGEEEN
LQEVFSTMVGRKRKRSRAAGDGARKKPQPPAQRDEDFYIPYRPKDFESERGLSVGGEGSA
FEQQAAGAVLDLMGDESHNLNRSKQLLKWDRKKKRFVGQTGQEEKKKVRTESGHYISSSY
KNNLYEKWKQKNKVDERDEDEDNQGGREQYRGKHKRGHAPRKAPGQGKVRSELKTKQQIL
KQRKAAAKQRFLQRGGMKRLRARNRQRMRELQQMAFGRVGATKKGKLRKKM
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgggttcccgcaagcggcgcggaccgagcggagctggggagaagaaccgg
gcagctccagcgtttcccgtgccctcgctgccctcattccccacggctgaggacgatggt
gccgacgcggcggacacggcggcgatggtgcgggcacagaacaagaagaagaaatccgga
ggcttccagtccatggggctgagctaccccgtcttcaagggtgtgatgaagaagggctat
aaagtgcccactcccatccagaggaagaccatcccggtgatcctgcgtggccgtgacgtg
gtggcgatggcacggacgggcagtgggaagacggcctgcttcctcctgcccatgttcgag
cggctgaaggcacccagcccttctggagcacgcgcccttatcctctcacccacgcgtgag
ctggccctgcagaccctcaagttcaccaaggagctgggcaagttcacaggcttgaagacc
gctcttgtgctggggggagacaagatggaggatcagtttgctgcgctgcacgagaaccct
gacataatcattgccacccctgggcgcctggtgcatgtagcagtggagatgaacctgaag
ctgcacagcgtggagtacgtggtgttcgacgaggctgacagactctttgagatgggcttt
gcagaacagctccaagagatcctcgctcggctgccgggtagccaccagactgtcctcttc
tcagccacgctgcccaaactgctcgttgagtttgcccgtgctggtctcactgaaccaatg
ctgatacgtctggatgtggagtcaaagctgagtgagcagctcaagctggctttcttccac
gtgcgtggagatgacaaaccagctgtgctgctccacctgctccgcaacgtggtgaagccc
caggatcagacagttgtctttgtggctacaaagcaccacacagagtatctgaaggagcta
ctcacgtcccagggcatctgctgtacccatatctacagctcactggaccagactgcccgc
aagatcaacattgccaagtttgcccatggcaagtgccaggtgctgctggtgacagatgtg
gccgcccgtgggctcgacatccccatgctggacaatgtcatcaactacagcttccctgcc
aagtccaagctgtttgtgcaccgtgttggtcgtgtggcccgggctggccgcagtggcact
gcctactctctggtggctcctgatgagatgccctacatctttgacctccatctcttcctg
gggcgcccactcatccttgctggtgcccaggagatgcctgcagatgcagatggggtcctg
ggtcgcgtcccgcagagcttggtggatgatgaggagtgtctgctgctgacagaccacgag
ggctcactggagctgcagagcctgcgccgtgtggctgacaatgcccagaagcagtacctg
cgctcccggcccagcccctcacccgagtccatcaagagggtgaaggagatggacacttct
cagctgggcatccacccactcttcagtgctcactttgaggacactgaattggagaggctg
aagttagtggacagcattaaagcctacaagtccaaggcgaccatctttgagatcaacgcc
acagcccacacgttggccagcagcatcatgcgctccaagcggcggcacgaccgtgccctc
atcgagaagttccatcgtgggcagcaggagaagcgggcagcagctctcgagggacagagg
ctgcaccctgtcaccccagccacccccaggcctgaggaggaggaaggagaggaggaaaac
ctccaggaggtgttctccaccatggtgggacggaagcgcaagcggagccgggctgcagga
gatggtgccaggaaaaagccacagccaccagcacagcgggatgaggacttctacatccca
tatcggcctaaggactttgagagtgagcgggggttgagtgttggcggtgagggcagtgcc
tttgagcagcaggcggctggggctgtgctggatctcatgggcgatgaaagccacaacctg
aacaggagcaaacagctgctgaagtgggaccgcaagaagaagcgctttgtgggacagacg
ggccaggaagagaagaagaaagtgcggacggagagtgggcactacatcagcagctcctac
aagaacaacctctatgagaagtggaagcagaaaaacaaggttgatgagcgagacgaggat
gaagacaaccaaggaggccgggagcagtacagagggaagcacaaacgtgggcacgccccc
cggaaggcccctggccagggcaaagtgcgctcggagctgaagaccaagcagcagatcctg
aagcagcgcaaggcagcggccaagcagcgcttcctgcagcgcgggggcatgaagcgcctg
agggcacggaaccggcagcggatgcgggagctgcagcagatggcgtttggccgcgttggg
gccaccaagaagggaaagctccggaaaaagatgtag
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