Coturnix japonica (Japanese quail): 107321464
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Entry
107321464 CDS
T04297
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X2
KO
K10756
replication factor C subunit 3/5
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03030
DNA replication
cjo03410
Base excision repair
cjo03420
Nucleotide excision repair
cjo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107321464 (RFC5)
03410 Base excision repair
107321464 (RFC5)
03420 Nucleotide excision repair
107321464 (RFC5)
03430 Mismatch repair
107321464 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjo03032
]
107321464 (RFC5)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107321464 (RFC5)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107321464 (RFC5)
DNA replication proteins [BR:
cjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107321464 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
107321464 (RFC5)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107321464 (RFC5)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107321464 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
107321464 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_24
AAA_11
AAA_assoc_2
AAA_14
DEAD
ResIII
RuvB_N
DUF815
AAA_5
AAA_30
AAA_19
PhoH
AAA_7
ATPase_2
TIP49
TniB
DNAX_ATPase_lid
nSTAND3
Mg_chelatase
Gp44_lid
AAA_25
Thioredoxin_6
AAA_3
bpMoxR
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
107321464
NCBI-ProteinID:
XP_015733878
LinkDB
All DBs
Position
15:complement(10011738..10014330)
Genome browser
AA seq
329 aa
AA seq
DB search
MAGPSGRNLPWVEKYRPRALSELVSHRDILSTIQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREKEFSSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVSEDGMKALVTLSSGDMRRALNVLQSTSMAFGKVTEENVYTCTGHPLKADIANIL
DWMLNQNFSTAYHKIMELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYR
LAAGTSEKVQLSSLIAAFQDTRDLIVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccgagcgggaggaacctgccgtgggtggagaagtaccggccgcgggcgctg
tcggagctggtgtcgcaccgggacatcctcagcaccatccagcggttcatcagtgaggac
cggctgccccacctgctgctctacggcccccccggcaccgggaagacctccaccatcctg
gcatgtgcacggcagctctaccgcgagaaggagttcagctctatggtgttggagctgaat
gcatcggacgaccgcggcattgacatcgtgcgagggcccatcctgagctttgccagcacc
aggaccatcttcaagaaaggcttcaagctcgtcatcctggatgaagctgatgccatgaca
caggatgcacagaacgctctgcgccgagtgattgagaagttcactgagaacactcgcttc
tgcctcatctgcaactacctctccaagatcatcccagccctgcagtcccgctgcacccgc
ttccgcttcgggcccctcacccccgagctgatggtgcctcggttgcagcacgtcatccag
gaggagggggtggacgtgagtgaggatgggatgaaggcgctggtgacgctctcgagcggt
gacatgcgcagagccctcaacgtcctgcagagcacctccatggcctttgggaaggtgaca
gaggagaatgtctacacctgcacaggacatcccctcaaggccgacatcgccaacatcctc
gactggatgctcaaccagaacttctccactgcctatcacaaaatcatggagctgaagaca
ctgaagggcctggctctgcaggacatcctcaccgagatccacctctttgtgcacagagtt
gatttcccaccctcagtccgcatccagctgctgatcaagatggcagacattgagtaccgg
ctggctgcaggcaccagcgagaaggtgcagctgagctccctcatcgcagcgttccaggac
accagggacctgattgtggctgaagcatga
DBGET
integrated database retrieval system
