Coturnix japonica (Japanese quail): 107321591
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Entry
107321591 CDS
T04297
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107321591 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107321591 (PRPF4)
Spliceosome [BR:
cjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107321591 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
107321591
NCBI-ProteinID:
XP_015734121
UniProt:
A0A8C2YE59
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Position
17:complement(810897..816438)
Genome browser
AA seq
537 aa
AA seq
DB search
MAAVRAPVARGGARPAAVRGPAPPEPTKNKPSEDGDAPPAKRAPIFYGSLEEKERERLAK
GEPGLLGKEGMKAALEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDD
SEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQT
WYHEGPRSLKTARLWLANYSLPRAAKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFC
SQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKA
TVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHNMRVARVMWHPSGRFLGTTCYDH
SWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG
HLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFL
LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgcgggcaccggtggctcgaggcggggcgcggcctgcggctgtgaggggc
cccgcaccgcctgagcccacgaagaacaaaccgtccgaggatggcgatgctccccccgcc
aagagggcgcccatcttctatggcagcctggaggagaaggagcgggagcggctggccaag
ggggagcccgggctgctggggaaggagggaatgaaggcggccctggaggccgggaacatc
aacatcagcagcggtgaggtctttgatctggaggatcacatgagtgagcgacaggccgaa
gtcttggctgagtttgagcgcaggaagcgagcccggcaaatcaacgtctccacggatgac
tctgaagtgaaggcctgtctgcgagccctcggggagcccatcacgctctttggagaaggt
cccgcagagaggagggagaggttaagaaatatcctctcagtggtcggcacagatgcatta
aaaaagacaaggaaagatgacgacaggtcgaaaaagtctaaagaagagtatcaacagact
tggtaccatgaaggaccacggagtctgaaaacagcaaggctgtggcttgctaactactcg
cttcccagggcagcgaagcgtctggaagaagcccggctgctcaaagagattccagaggca
accaggacatcgcagagacaagaactgcacaaatccctacgatccttgaataacttctgt
agtcagattggggacgatcgcccgctgtcctactgccacttcagtcccaattccaaactc
ttggctactgcctgttggagtggactgtgcaagctgtggtctgtgcctgactgtaacctt
gttcacaccttacgaggacacagcaccaacgtaggagcaatagtcttccatcccaaagcc
actgtctccctcgacaagaaggatgttaacttggcctcgtgtgcagctgatggttctgtc
aaactctggagccttgaaagtgacgaaccagtggcagatattgaaggccacaacatgcga
gtggcacgtgtgatgtggcacccttccggcaggttcctgggcactacctgttacgatcac
tcgtggcgcctgtgggacttggaagcccaggaagagattctccatcaggaggggcacagc
aaaggggtctatgacatcgcctttcacacggacgggtctcttgctgggacgggtggactg
gatgcttttggccgcgtgtgggatttgcgcaccgggcgctgtatcatgtttctggaaggc
cacctgaaggagatctatggacttaacttctccccaaatggataccacgttgcaactggc
agtggtgacaatacttgcaaggtctgggacctccggcagagaaagtgcatctacaccatt
cctgcccatcagaacctggtgactggggtgaaatttgaacccaatcacggtaacttcctg
ctgacaggcgcctatgataacactgccaagatctggactcaccctggctggtcccctctg
aaaacactggctggtcatgagggaaaggtgatgggactggacatctccctcgatggccag
ctgatagcaacgtgctcctatgacagaaccttcaagttgtggacagcagagtag
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integrated database retrieval system
