KEGG   Coturnix japonica (Japanese quail): 107321878
Entry
107321878         CDS       T04297                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03320  PPAR signaling pathway
cjo04148  Efferocytosis
cjo04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    107321878 (RXRA)
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    107321878 (RXRA)
   03320 PPAR signaling pathway
    107321878 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cjo03000]
    107321878 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cjo03310]
    107321878 (RXRA)
Transcription factors [BR:cjo03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    107321878 (RXRA)
Nuclear receptors [BR:cjo03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   107321878 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3 CRT10
Other DBs
NCBI-GeneID: 107321878
NCBI-ProteinID: XP_015734796
LinkDB
Position
17:5798430..5871387
AA seq 439 aa
MATPSLHPSIGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
SLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPND
PVTNICQAADKQLFTLVEWAKRIPRFSALPLDDQVILLRAGWNELLIASFSHRSIAVQDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccaccccatccctgcacccgtccattgggccgggcatcggctcctcgctgggctct
ccgggccagctgcattcacccatcagcaccctgagctcgcccatcaatggcatggggcca
cccttctccgtcatcagctcccccatgggcccacactcgatgtctgtcccctccacaccc
agcctgggattcggcaccagcagcccacagctcaactcacccatgaaccccgtcagcagc
tcagaagacatcaagccacccctggggctcaatggagtcctcaaagtgccagcacatccc
tcaggaacaatggcctccttcaccaagcacatatgtgccatctgcggggacagatcttca
ggtaaacattatggggtgtacagctgtgagggctgcaaaggcttcttcaaacgcacggtg
aggaaggacctgacctacacctgccgtgacaacaaggactgcttgatcgacaagcgccag
cgcaaccgctgccagtactgccgctaccagaagtgtcttgccatggggatgaagagggaa
gctgtgcaggaggagaggcagcgggggaaagaccgcaacgagaacgaggtggagtccaca
agtagcgccaacgaggacatgcctgtggagaagatcctggaagcagaactcgctgtggag
ccaaagacagagacgtacattgaggcaaacatgggcctgacgccgagctcgcctaatgac
ccggtgacgaacatttgccaggcggccgacaagcagctcttcaccttggtggagtgggcc
aagaggatccccaggttctctgcgctgccattggacgaccaggtcatcctgctcagggcc
ggttggaatgagctcctcatcgcctccttctcccatcgctccattgctgttcaggacggg
atcctgctggccactgggctgcacgtgcaccgcaacagcgcgcacagcgccggcgtcggg
gccatctttgacagagtactgacagaactcgtgtcgaagatgcgagacatgcagatggac
aagacggagctgggctgcctcagggccatcatcctctttaacccagactcaaaagggctc
tccaacccggctgaagtggaggcactacgggagaaggtgtacgcatcgctggaggcgtac
tgcaagcacaaataccccgaccagcctgggaggttcgccaagctgctgctccgccttccg
gcccttcgctccatcggcctcaaatgcctggagcatttgttcttcttcaagctaataggc
gacacgccgatcgacaccttcttgatggaaatgctggaagcaccccatcaaatgacatag

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