Coturnix japonica (Japanese quail): 107321878
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Entry
107321878 CDS
T04297
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
KO
K08524
retinoid X receptor alpha
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03320
PPAR signaling pathway
cjo04148
Efferocytosis
cjo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107321878 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107321878 (RXRA)
03320 PPAR signaling pathway
107321878 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107321878 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cjo03310
]
107321878 (RXRA)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107321878 (RXRA)
Nuclear receptors [BR:
cjo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107321878 (RXRA)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
107321878
NCBI-ProteinID:
XP_015734796
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Position
17:5798430..5871387
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AA seq
439 aa
AA seq
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MATPSLHPSIGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
SLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPND
PVTNICQAADKQLFTLVEWAKRIPRFSALPLDDQVILLRAGWNELLIASFSHRSIAVQDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccatccctgcacccgtccattgggccgggcatcggctcctcgctgggctct
ccgggccagctgcattcacccatcagcaccctgagctcgcccatcaatggcatggggcca
cccttctccgtcatcagctcccccatgggcccacactcgatgtctgtcccctccacaccc
agcctgggattcggcaccagcagcccacagctcaactcacccatgaaccccgtcagcagc
tcagaagacatcaagccacccctggggctcaatggagtcctcaaagtgccagcacatccc
tcaggaacaatggcctccttcaccaagcacatatgtgccatctgcggggacagatcttca
ggtaaacattatggggtgtacagctgtgagggctgcaaaggcttcttcaaacgcacggtg
aggaaggacctgacctacacctgccgtgacaacaaggactgcttgatcgacaagcgccag
cgcaaccgctgccagtactgccgctaccagaagtgtcttgccatggggatgaagagggaa
gctgtgcaggaggagaggcagcgggggaaagaccgcaacgagaacgaggtggagtccaca
agtagcgccaacgaggacatgcctgtggagaagatcctggaagcagaactcgctgtggag
ccaaagacagagacgtacattgaggcaaacatgggcctgacgccgagctcgcctaatgac
ccggtgacgaacatttgccaggcggccgacaagcagctcttcaccttggtggagtgggcc
aagaggatccccaggttctctgcgctgccattggacgaccaggtcatcctgctcagggcc
ggttggaatgagctcctcatcgcctccttctcccatcgctccattgctgttcaggacggg
atcctgctggccactgggctgcacgtgcaccgcaacagcgcgcacagcgccggcgtcggg
gccatctttgacagagtactgacagaactcgtgtcgaagatgcgagacatgcagatggac
aagacggagctgggctgcctcagggccatcatcctctttaacccagactcaaaagggctc
tccaacccggctgaagtggaggcactacgggagaaggtgtacgcatcgctggaggcgtac
tgcaagcacaaataccccgaccagcctgggaggttcgccaagctgctgctccgccttccg
gcccttcgctccatcggcctcaaatgcctggagcatttgttcttcttcaagctaataggc
gacacgccgatcgacaccttcttgatggaaatgctggaagcaccccatcaaatgacatag
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