Coturnix japonica (Japanese quail): 107322006
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Entry
107322006 CDS
T04297
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107322006 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107322006 (DDX5)
03009 Ribosome biogenesis [BR:
cjo03009
]
107322006 (DDX5)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107322006 (DDX5)
Spliceosome [BR:
cjo03041
]
Complex A
U1 snRNP components
U1 related factors
107322006 (DDX5)
Complex B
107322006 (DDX5)
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
Pre-60S particles
Helicases
107322006 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
107322006
NCBI-ProteinID:
XP_015735041
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All DBs
Position
18:7251150..7258689
Genome browser
AA seq
603 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKAQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPAS
YSQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggacagagggtttggagcccctcgttttggaggaagt
agagctggtccactttctgggaaaaaatttggaaaccccggggaaaagctgaccaaaaag
aaatggaatttagatgaactgcccaaatttgagaagaacttctatcaagaacatcctgat
gtagtcagacgaactgcgcaagaggttgagcagtacaggtcaagcaaagaagtcacagtg
aggggccataactgtccaaaaccaatcataaacttctatgaagctaactttcctgcaaat
gttatggaggtgattcagaggcagaacttcactgagcctactgctattcaagcacaggga
tggcctgttgccctgagtggattggatatggttggagttgcacagactggatcagggaaa
acgctgtcttacttgttgcctgctattgtgcatataaatcatcagccattcctggagaga
ggagatggacctatttgtcttgtgctggcaccaactcgggaactggctcagcaagtgcag
caagtagctgctgaatatagcagagcatgtcgcttgaagtctacgtgtatttatggaggt
gctccaaagggaccacaaattcgtgatctagaaagaggtgtggaaatctgcattgcaaca
cctggaagacttatagacttcttagaagctgggaagaccaacctcaggaggtgcacttac
ctagtgcttgatgaagctgatagaatgcttgacatgggtttcgaacctcaaatcagaaaa
attgtggatcagataagacctgacaggcagactctgatgtggagtgccacgtggccaaag
gaagtcaggcagctggctgaagacttcttaaaagaatatgtccacatcaacatcggtgca
ttggaactgagtgcaaaccacaacatcctgcagattgttgatgtgtgtcatgacgttgag
aaggacgacaagcttattcgtttgatggaggaaataatgagtgagaaggaaaataagaca
attgtttttgtggaaaccaaaagacgttgtgatgatcttaccaggaaaatgaggagagat
ggatggccagcaatgggtattcatggtgataaaagccagcaggagcgagactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatcccgaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatatacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccctaagttgcttcagttgattgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagctttagagag
agggagaactttgagagaacttatggtgcactaggaaagagagactttggagccaaagct
cagaatggggcctacagcgcccagagtttcagtaatggaactccttttggaaatggcttt
gcagctgcaggcatgcaggctggcttcagggccggtaaccctgcaggagcttaccagaat
ggctatgatcagcagtacgggagtaacattgcaaatatgcacaatggcatgaaccagcag
cagtatgcgtatcctgccactggtgctgctcctatgataggttacccaatgccagcgagt
tattctcaataa
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