Coturnix japonica (Japanese quail): 107322062
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Entry
107322062 CDS
T04297
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04622
RIG-I-like receptor signaling pathway
cjo05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107322062 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107322062 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107322062 (TRIM25)
Enzymes [BR:
cjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107322062 (TRIM25)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107322062 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
ANCHR-like_BBOX
zf-RING_2
zf-C3HC4
zf-B_box
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
107322062
NCBI-ProteinID:
XP_015735139
LinkDB
All DBs
Position
18:7754241..7763028
Genome browser
AA seq
668 aa
AA seq
DB search
MVRNFTEIRSPSFVSSGSGGSSGIMASMSRTKSEPNLLELEEELTCSICLCIFNVPVTVP
CGHNFCASCLELTWAGQVRDLSCPQCRATFPSRPQLRKNTVLCRVVEQMRGSGTGDGKED
DESEEEEREAATLIYCDSCLQAAATQTCLTCMASFCPEHLRPHHDSPAFRDHRLCPPVRD
LQQRKCPQHNKLFEFFCSQHGCCICSLCLLSHKPCHTSTLQEAKDKTEAALKKRLVELHN
QSERSVQAMNSVKTIQSQAAETAARKRDLLRAEFMEIKALIEEKENQTLKVVMEEEKRVC
NKFDYIYKILGSKKNEIQSLRDQIEMALTEGDDVLFLKRAAALQRTSIKEAFVPVIEMDH
NMIHAAYQSAINLKDAVKLAVNASVDKRTDAKPPPGKTKPPSVPSTNKPVVKKKIAADLR
THREKIPPSPKITVLEETDTQDKKNPVKPAPNVGAPNVGAPGTGAPNAAIAVKVKELITS
FLKRPREELMQYAANIMLDFNTAHNKVALSERYTKMSVSDTLLNYNHHPQRFTDCPQVLG
FQFFKRGIHYWEVELQQNNFCGIGICYGSMGRQGPDSRLGRNSSSWCIEWFNSKISAWHN
DVEKCLPNTKATKIGVLLHCDGGFVLFLSVEEKLNLIYKFKAQFTEAVYPAFWLFSSGTV
LSLCQMKP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtaattttacggaaatccgcagccccagtttcgtttcctcggggtctggaggc
agcagcgggataatggcgtcgatgagcagaactaagtcggagccgaacctgttggagctg
gaggaggagctgacgtgctccatctgcctctgcatcttcaacgtccccgtgacggtgccc
tgcggacacaacttctgcgcctcctgcctggagctcacctgggccggccaggtgcgggac
ttgagctgccctcaatgccgcgccaccttcccgagccgcccgcagctccgcaagaacacg
gtgctgtgccgggtggtggagcagatgcggggcagcgggaccggggacggcaaggaggac
gatgagagcgaggaggaagaacgggaggcggcgaccctcatctactgcgacagctgcctg
caggcggccgccacgcagacctgcctcacctgcatggcttccttctgccccgagcacctg
cggccgcaccacgacagcccggcgttccgcgaccatcggctgtgcccgcccgtgcgggac
ctgcagcagagaaagtgcccgcagcacaacaagctctttgagttcttctgcagccagcac
ggctgctgcatctgctcgctgtgcctgctgagccacaagccgtgccacaccagcacgctg
caggaggccaaagataaaaccgaggctgcactgaagaagaggctggtggagctgcacaac
cagagtgaaagatccgtgcaagcaatgaactctgtgaaaacaatccagagtcaagctgct
gagacagctgccagaaagcgggatctgctgagagctgagtttatggaaattaaagcttta
attgaagaaaaagaaaaccagaccctaaaagtagttatggaagaagaaaaaagagtttgc
aataagttcgattacatatataaaattctgggaagtaagaagaatgaaattcagtctctg
agagaccagattgagatggcactgaccgaaggggatgacgttctctttttaaagagagca
gcagcgctgcaacgaacatcaataaaagaggcctttgtcccagtaatagaaatggaccac
aacatgatacacgctgcttatcagtctgccattaaccttaaagatgctgtcaaacttgca
gtgaatgcgtctgtggataaaagaacggatgccaaaccaccacctggcaaaacgaagccc
ccttcagtgccttccacaaacaaacccgttgttaaaaagaagattgctgcagacttgcgt
actcacagagagaaaatccctccctcccctaagatcactgtgctggaggagacagatacc
caggacaaaaagaatcctgttaaacccgcaccaaatgtgggagcaccaaacgtgggagca
ccgggcacaggagcaccaaatgctgcaattgctgttaaagtgaaagaactaataaccagc
ttcctgaaaagacccagagaggagcttatgcagtatgccgctaacatcatgctggatttc
aacacagctcacaacaaagtggctctgtctgagagatacaccaagatgtctgtttcagac
accctgctgaattataaccaccaccctcagcgtttcaccgactgtccccaagtgttgggg
ttccagttcttcaagagaggcatccactactgggaagtggaactgcagcagaacaacttc
tgtggcattggcatctgctatggcagcatggggcggcaggggccggacagccgcctgggt
aggaacagcagttcatggtgtatcgagtggtttaactccaaaatttcagcctggcataat
gatgttgagaagtgcttacccaatacaaaggctactaagatcggtgtgctgctccactgt
gatggagggttcgtgcttttcttgagtgtcgaggaaaagcttaacttgatctataaattc
aaggcccagtttactgaagctgtgtaccctgccttctggttattttccagtggcactgtt
ctctctctatgccaaatgaaaccataa
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