Coturnix japonica (Japanese quail): 107322433
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Entry
107322433 CDS
T04297
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04142
Lysosome
cjo04144
Endocytosis
cjo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107322433 (CLTC)
04142 Lysosome
107322433 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107322433 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107322433 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjo04147
]
107322433 (CLTC)
Membrane trafficking [BR:
cjo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107322433 (CLTC)
Exosome [BR:
cjo04147
]
Exosomal proteins
Proteins found in most exosomes
107322433 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
107322433
NCBI-ProteinID:
XP_015735950
LinkDB
All DBs
Position
19:6031447..6061218
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHASLAGCQIINYRTDAKQKWLLITGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatattaccgatccgcttccaggagcacctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacgatggaatcagacaaatttatctgcata
agagagaaagttggagaacaggctcaagtggtgatcattgacatgaatgaccctagcaac
ccaattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcgttaaaagctgggaaaacgcttcaaatatttaacattgaaatgaagagtaaaatgaag
gctcatacaatgacggatgatgtcaccttctggaagtggatctctctgaatactgtcgcc
cttgtaacggataatgcagtctaccattggagtatggagggggagtcccagcctgtgaag
atgtttgatcggcatgctagtcttgcaggctgccagatcatcaactaccgcactgatgcg
aagcagaaatggctactaataactggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattccgtagacaggaaagtttcacagccgatcgaggggcacgcagctagc
tttgcacagttcaagatggaaggaaatgctgaagaatccactctcttttgttttgcagta
agagggcaagctgggggtaagttgcacatcatcgaggttggcacaccaccaactgggaat
cagcccttcccaaagaaagcagtggatgtcttctttcctcctgaagcacagaatgacttt
cctgttgcgatgcagatcagtgacaagcatgatgtggtgtttctgataacaaaatatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttactgcccaacatgaagcaacagctggaattataggagtaaacagg
aagggacaagtgttatcagtctgtgtggaagaagagaatattattccctacatcaccaat
gttctgcagaatcctgacctagctttacgaatggccgtccgcaacaacctggctggagct
gaggaactttttgccagaaaattcaatgcattgtttgcacaagggaactattcagaggca
gcaaaggtggcggctaatgcccctaagggaattctgcgtactccagacaccatacgccgt
ttccagagtgttccagcacaaccaggacagacttcccctttactccagtatttcggtatt
ctacttgaccaagggcaactgaataaatatgagtctctggaactttgcagaccagtgctt
cagcagggccgcaagcaacttctggaaaaatggttgaaggaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagatcctaccctagcacttagtgtctatctg
agagccaatgttccaaataaagtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggattttcttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcccaaatgcttgttcaagatgaa
gagcctcttgcggatataacacaaattgtggatgtttttatggaatataacttaattcag
caatgtacggccttcttactggatgcactgaagaataatcgcccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcaccccaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgatcgggctcacatagctcagctgtgtgagaaagct
ggcttgctgcagagagcacttgagcacttcacggacttgtatgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggctagtgaactactttggctccttgtcagta
gaagattcactggagtgtctgcgtgctatgttatctgccaacattcgccagaacctgcag
atctgtgtccaggtagcttcaaagtaccatgaacagctgtcgacacagtcacttattgag
ctgtttgagtccttcaagagcttcgaaggtttgttttatttcctgggctccattgtaaac
ttcagccaggatccagatgttcacttcaagtatatccaggcagcttgcaagactggtcag
ataaaggaagtagaaagaatttgcagggaaagcaactgctatgatcctgaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagttaccgctcatcattgtatgtgatcgc
ttcgactttgtccacgacttggtgctgtacttatatagaaataatctccaaaaatatatt
gagatttatgtgcagaaggtgaatccaagccgcctgcctgttgttattgggggactgctt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggccagttt
tcaactgatgaacttgttgcagaagttgagaagagaaacaggctgaaactacttttgccc
tggctggaggcaagaattcatgagggttgtgaggagcctgcaacacacaatgcattggcc
aaaatatacattgatagcaacaacaacccagaaagatttttgcgtgagaatccttactat
gatagccgagttgttggcaagtactgtgagaagagggacccgcacctggcctgtgtggct
tatgaacgtggacaatgtgatttggaactgatcaatgtgtgcaatgagaactctctcttc
aaaagcctttcccgctacttagttcgccgtaaagaccctgaactgtgggccagcgtgctg
ctggaaagcaacccatatagaaggccactaattgaccaggttgtccaaacagctttatca
gagacacaggatcctgaggaggtttctgtcactgtgaaagctttcatgactgcagatctt
cccaatgagcttattgaactgctggagaaaatagttctcgataactctgtattcagtgag
cacaggaacctgcagaacctgctaattcttacagctattaaggctgatcgtacccgtgta
atggaatacattaatcgactggataactatgatgctccagacatagccaatatcgctatc
agtaatgagctctttgaggaggcatttgccatcttcaggaagtttgatgtgaacacatcg
gctgtacaggtattaatagagcacattggaaacctggatcgtgcatatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaagggatg
gtaaaggaagcaattgattcatacattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaggaactggtgaaatatcttcagatggca
cgcaagaaggcccgggaatcgtatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctggcagagctagaagaatttatcaatggacccaacaatgcgcatatccagcaa
gttggtgatcgctgttatgatgaaaagatgtatgaagctgctaagctcttgtataacaac
gtgtccaactttggccgtttagcctcaactttagttcacctgggtgaataccaggcggct
gtggatggtgctcggaaagcaaacagtactcgcacatggaaagaggtctgctttgcttgt
gttgatggaaaagaattccgcctggcccagatgtgtggacttcacattgtagtgcatgca
gatgagttggaagagctaatcaattattaccaggatcgtggctattttgaagagctgata
actatgttggaagcagcacttggacttgagcgagcacacatggggatgtttacagagtta
gccattctttactccaagttcaaaccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaagcccatctctgggctgaa
ttggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaactgatgcatggaaagaaggacaattcaaagatatcataactaaggtggccaat
gtggagctgtactacaaagcagttcaattctatttggaattcaaacctctgttgcttaat
gatctgctgatggtgttgtcccctcgtcttgaccatactcgtgctgtcaccttcttcaca
aaggttaagcagttacccctggtgaaaccttacttgcgctctgttcaaaatcacaacaac
aaatcagtgaatgagtccctgaacaacctcttcattattgaagaagactaccaggccctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacacgagctgatagagttccgaaggattgctgcatacctgttcaaaggaaacaaccgc
tggaagcagagtgtggaactctgtaagaaagacagactgtataaggatgcaatgcaatat
gcttcagaatccaaagatactgagttggcagaagaattgttgcagtggttcttgcaggag
aacaagaaggaatgctttggtgcttgtctctttacctgctatgatcttttaaggcctgac
gttgtcttggaaacagcgtggaggcacaacatcatggactttgccatgccatactttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtccttgagaaaggaagaggagcaagctactgaaacacaacctattgtt
tatggtcagccacaactcatgttgacagcaggacccagtgttgcagttcctccacaagca
ccttttggctatggttacactgcaccaccatacgggcaaccgcagccaggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system