KEGG   Coturnix japonica (Japanese quail): 107322433
Entry
107322433         CDS       T04297                                 
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
  KO
K04646  clathrin heavy chain
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo04142  Lysosome
cjo04144  Endocytosis
cjo05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107322433 (CLTC)
   04142 Lysosome
    107322433 (CLTC)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    107322433 (CLTC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cjo04131]
    107322433 (CLTC)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjo04147]
    107322433 (CLTC)
Membrane trafficking [BR:cjo04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    107322433 (CLTC)
Exosome [BR:cjo04147]
 Exosomal proteins
  Proteins found in most exosomes
   107322433 (CLTC)
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_Vps41 TPR_1
Other DBs
NCBI-GeneID: 107322433
NCBI-ProteinID: XP_015735950
LinkDB
Position
19:6031447..6061218
AA seq 1682 aa
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHASLAGCQIINYRTDAKQKWLLITGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq 5049 nt   +upstreamnt  +downstreamnt
atggcccaaatattaccgatccgcttccaggagcacctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacgatggaatcagacaaatttatctgcata
agagagaaagttggagaacaggctcaagtggtgatcattgacatgaatgaccctagcaac
ccaattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcgttaaaagctgggaaaacgcttcaaatatttaacattgaaatgaagagtaaaatgaag
gctcatacaatgacggatgatgtcaccttctggaagtggatctctctgaatactgtcgcc
cttgtaacggataatgcagtctaccattggagtatggagggggagtcccagcctgtgaag
atgtttgatcggcatgctagtcttgcaggctgccagatcatcaactaccgcactgatgcg
aagcagaaatggctactaataactggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattccgtagacaggaaagtttcacagccgatcgaggggcacgcagctagc
tttgcacagttcaagatggaaggaaatgctgaagaatccactctcttttgttttgcagta
agagggcaagctgggggtaagttgcacatcatcgaggttggcacaccaccaactgggaat
cagcccttcccaaagaaagcagtggatgtcttctttcctcctgaagcacagaatgacttt
cctgttgcgatgcagatcagtgacaagcatgatgtggtgtttctgataacaaaatatggc
tatatccacttgtatgacctggaaactggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttactgcccaacatgaagcaacagctggaattataggagtaaacagg
aagggacaagtgttatcagtctgtgtggaagaagagaatattattccctacatcaccaat
gttctgcagaatcctgacctagctttacgaatggccgtccgcaacaacctggctggagct
gaggaactttttgccagaaaattcaatgcattgtttgcacaagggaactattcagaggca
gcaaaggtggcggctaatgcccctaagggaattctgcgtactccagacaccatacgccgt
ttccagagtgttccagcacaaccaggacagacttcccctttactccagtatttcggtatt
ctacttgaccaagggcaactgaataaatatgagtctctggaactttgcagaccagtgctt
cagcagggccgcaagcaacttctggaaaaatggttgaaggaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagatcctaccctagcacttagtgtctatctg
agagccaatgttccaaataaagtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggattttcttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcccaaatgcttgttcaagatgaa
gagcctcttgcggatataacacaaattgtggatgtttttatggaatataacttaattcag
caatgtacggccttcttactggatgcactgaagaataatcgcccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcaccccaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgatcgggctcacatagctcagctgtgtgagaaagct
ggcttgctgcagagagcacttgagcacttcacggacttgtatgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggctagtgaactactttggctccttgtcagta
gaagattcactggagtgtctgcgtgctatgttatctgccaacattcgccagaacctgcag
atctgtgtccaggtagcttcaaagtaccatgaacagctgtcgacacagtcacttattgag
ctgtttgagtccttcaagagcttcgaaggtttgttttatttcctgggctccattgtaaac
ttcagccaggatccagatgttcacttcaagtatatccaggcagcttgcaagactggtcag
ataaaggaagtagaaagaatttgcagggaaagcaactgctatgatcctgaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagttaccgctcatcattgtatgtgatcgc
ttcgactttgtccacgacttggtgctgtacttatatagaaataatctccaaaaatatatt
gagatttatgtgcagaaggtgaatccaagccgcctgcctgttgttattgggggactgctt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggccagttt
tcaactgatgaacttgttgcagaagttgagaagagaaacaggctgaaactacttttgccc
tggctggaggcaagaattcatgagggttgtgaggagcctgcaacacacaatgcattggcc
aaaatatacattgatagcaacaacaacccagaaagatttttgcgtgagaatccttactat
gatagccgagttgttggcaagtactgtgagaagagggacccgcacctggcctgtgtggct
tatgaacgtggacaatgtgatttggaactgatcaatgtgtgcaatgagaactctctcttc
aaaagcctttcccgctacttagttcgccgtaaagaccctgaactgtgggccagcgtgctg
ctggaaagcaacccatatagaaggccactaattgaccaggttgtccaaacagctttatca
gagacacaggatcctgaggaggtttctgtcactgtgaaagctttcatgactgcagatctt
cccaatgagcttattgaactgctggagaaaatagttctcgataactctgtattcagtgag
cacaggaacctgcagaacctgctaattcttacagctattaaggctgatcgtacccgtgta
atggaatacattaatcgactggataactatgatgctccagacatagccaatatcgctatc
agtaatgagctctttgaggaggcatttgccatcttcaggaagtttgatgtgaacacatcg
gctgtacaggtattaatagagcacattggaaacctggatcgtgcatatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaagggatg
gtaaaggaagcaattgattcatacattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaggaactggtgaaatatcttcagatggca
cgcaagaaggcccgggaatcgtatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctggcagagctagaagaatttatcaatggacccaacaatgcgcatatccagcaa
gttggtgatcgctgttatgatgaaaagatgtatgaagctgctaagctcttgtataacaac
gtgtccaactttggccgtttagcctcaactttagttcacctgggtgaataccaggcggct
gtggatggtgctcggaaagcaaacagtactcgcacatggaaagaggtctgctttgcttgt
gttgatggaaaagaattccgcctggcccagatgtgtggacttcacattgtagtgcatgca
gatgagttggaagagctaatcaattattaccaggatcgtggctattttgaagagctgata
actatgttggaagcagcacttggacttgagcgagcacacatggggatgtttacagagtta
gccattctttactccaagttcaaaccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaagcccatctctgggctgaa
ttggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaactgatgcatggaaagaaggacaattcaaagatatcataactaaggtggccaat
gtggagctgtactacaaagcagttcaattctatttggaattcaaacctctgttgcttaat
gatctgctgatggtgttgtcccctcgtcttgaccatactcgtgctgtcaccttcttcaca
aaggttaagcagttacccctggtgaaaccttacttgcgctctgttcaaaatcacaacaac
aaatcagtgaatgagtccctgaacaacctcttcattattgaagaagactaccaggccctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacacgagctgatagagttccgaaggattgctgcatacctgttcaaaggaaacaaccgc
tggaagcagagtgtggaactctgtaagaaagacagactgtataaggatgcaatgcaatat
gcttcagaatccaaagatactgagttggcagaagaattgttgcagtggttcttgcaggag
aacaagaaggaatgctttggtgcttgtctctttacctgctatgatcttttaaggcctgac
gttgtcttggaaacagcgtggaggcacaacatcatggactttgccatgccatactttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtccttgagaaaggaagaggagcaagctactgaaacacaacctattgtt
tatggtcagccacaactcatgttgacagcaggacccagtgttgcagttcctccacaagca
ccttttggctatggttacactgcaccaccatacgggcaaccgcagccaggctttgggtac
agcatgtaa

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