KEGG   Coturnix japonica (Japanese quail): 107322486
Entry
107322486         CDS       T04297                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03030  DNA replication
cjo03410  Base excision repair
cjo03420  Nucleotide excision repair
cjo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107322486 (RFC2)
   03410 Base excision repair
    107322486 (RFC2)
   03420 Nucleotide excision repair
    107322486 (RFC2)
   03430 Mismatch repair
    107322486 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cjo03032]
    107322486 (RFC2)
   03036 Chromosome and associated proteins [BR:cjo03036]
    107322486 (RFC2)
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107322486 (RFC2)
DNA replication proteins [BR:cjo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    107322486 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    107322486 (RFC2)
Chromosome and associated proteins [BR:cjo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    107322486 (RFC2)
DNA repair and recombination proteins [BR:cjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     107322486 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    107322486 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Viral_helicase1 AAA_24 Mg_chelatase AAA_11 Rad17 DNAX_ATPase_lid AAA_assoc_2 MipZ AAA_19 nSTAND3 RuvB_N AAA_18 AAA_5 AAA_28 ABC_tran AAA_30 AAA_25 AAA_23 NTPase_1 MeaB RNA_helicase SLFN-g3_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 107322486
NCBI-ProteinID: XP_015736039
UniProt: A0A8C2TE36
LinkDB
Position
19:2019230..2024262
AA seq 357 aa
MEEEVEIVEDDKAGPAAAEKRGPTDTLGSAPTASSHYEMPWVEKYRPLKLCEVVGNEDTV
SRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYTKLTDSQILARLLKIVEKENVPYTDDGLEAIIFTAQGDMRQALNNLQ
STYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWKLGYSPEDVIG
NIFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggaggaggaagtggagatcgtggaggacgacaaggccggacctgcggctgctgagaag
cggggacccaccgacacgctggggtccgctcctaccgccagcagccattacgagatgccc
tgggtggaaaaatacagacccctgaaactatgtgaagtagttggaaatgaagatacagtc
agcaggctggaggtctttgcaaaagaagggaatgtcccaaatattatcattgcgggtcca
cctggaacaggaaaaaccaccagcatcctctgcttggctcgtgctctgcttggccctgcg
ttaaaagatgctgttttggagctgaatgcctcaaatgacagaggcatcgatgttgtgagg
aacaaaatcaaaatgtttgctcagcagaaggtcacacttccaaaaggtcggcacaaaatc
atcatcctcgatgaagcagacagcatgacagatggagcccagcaagctttgagaagaaca
atggaaatctattccaaaacaacacgcttcgcactcgcatgcaatgcctctgataaaatc
atagagcccattcagtctcggtgtgcagtgctgcgttacaccaaactgacagactcacag
atcctcgcgaggctactgaaaatagttgaaaaagagaatgtaccatacactgatgatgga
ttagaagccattatcttcacagctcaaggagatatgagacaggccttgaacaacttacag
tccacatattctggatttggttttataaacagtgaaaacgtctttaaggtatgtgatgag
cctcaccctctgcttgtgaaagaaatgatacaacactgcatcaatgcaaacatcgatgag
gcatacaagattcttgcccacctatggaaacttggatactccccagaagatgtgattggc
aacatcttccgtgtgtgtaaaacctttcagatgccagaatatctgaagctggaatttatc
aaggaaattggctacacacatatgaagatagcagaaggcgtgaactcattgctgcaaatg
gctggactccttgccaggctgtgtcagaagactgcagctcctgcagcaagttag

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