Coturnix japonica (Japanese quail): 107322509
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Entry
107322509 CDS
T04297
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03440
Homologous recombination
cjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107322509 (BRIP1)
03460 Fanconi anemia pathway
107322509 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107322509 (BRIP1)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107322509 (BRIP1)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107322509 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
107322509 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
107322509
NCBI-ProteinID:
XP_015736092
LinkDB
All DBs
Position
19:6235506..6353296
Genome browser
AA seq
1455 aa
AA seq
DB search
MSSDVSQYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNKQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKSLLKSSCEKEDREPAASAPCRCVCHSRSESSEAAAGASRGAACSNYETGG
SVKTGGQQTDTECKDNNTLASKLSAKKRASVGGTESDDFQVDRKRIRPLETEQQVRKRHC
FSKEVQLVDALEVYNQRKNGELIVHCEKSVRNTSPQTLFSPCTECSCSSGKETRKDAGNT
KKKANGDQTFIPKIFFGTRTHKQIAQITRELKRTAYSGVSMTILSSRDYTCIHPVVSNSS
GNRNELCVELLEGKNGKSCLYYHGVHKLSEHFALHSAHNTYQAWDIEDLVSLGKKLRACP
YFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDSAREAVSYSVT
ESQVNAAREELDFMVNNNIRQKDHEQLRAVCYSLTNWLRESSSQLVETGYETSCKVWSGK
EMLNHFHEMGITNISFPILQKHLSAVLEKEEKISMFGKEELVEIPIVSSATQIVLKGLFM
VLFYLFKDNSRFADDYRVALQQTYAWTNENQPDVSDSSAFFTKTKHKRNLRHKTVVHMLN
FWCLNPAVAFSDLNDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWVGTI
GAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQKVGQGILCFLPSYKLLDKLKDRWIHT
GLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFKGEKDGALLIAVCRGKVSEGLDF
CDENARAVITIGIPFPNVKDLQVELKRKYNDQHKTTRGLLPGSQWYEIQAYRALNQALGR
CIRHRSDWGALILVDDRFRNNPNKYITGLSKWIRQQVQHHENFGSALESLHAFAERNQKG
IDCSSQCSNEFFHVPLNVKELSSASQQEATIHLSPDVPVKSEEQSLVQETHLTATIDSIN
PEPSNQPRNITAIIQQSGQKVDVESHSHNATQRRKHMDSTPRRPATKTEKKSDWTNSDFM
KGRCCFKPLTSTPSPVAMNCVSTASSEQRENVNRASELIGGVNQCQSSFTLEHKPNIRES
HLETTNFSVKNTEAPEEHLDEQKLQIEPCSGLPSVGGKPELSVLEMSAEAEDEDESIYFT
PELYDGEESEEGKIKAPDPDENQIECGKPTVADDLFVINTSKTLNEPKEIINDDGRNRSL
HGTMPSDISKNSAVNIEKMTNGKEADQVESQEVDTKKRKISLSRSRHKGLKVQRQYRRGK
ATVRARGNTCERKKENKRPCKRGLYCIICGAEILPKAEGILRKTCHGDIELKIILKLFKN
THVRSKESTNKCTCKLDVTSDDDNVMLVISDVASLSHLKETLKIYQTPVKNKGTNASLSL
NAVWNEKEYSLTSYLQCRNCLFQSVSPCPLIGAEVTHFSSEVQSWVWLLPSSVHYCLLLQ
SPQKRKTGNSDYTLS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtctcaatatacaattgggggagtgaagattatgttcccttgcaag
gcttatccgtcgcagcttgctatgatgaatgctattgttaagggcttaaataacaagcag
cactgtttgttggagagccccacaggaagtggcaaaagcttggcattgctttgttctgca
ttatcatggcagcagtctctgtatgagaaatcactgctcaaatcatcatgtgaaaaggag
gacagggagccagcagcctcagcgccgtgtcgctgtgtgtgtcattcccgatccgagagc
agcgaggcggctgcaggggcgagtcgtggtgctgcatgttctaattatgaaacaggaggc
tctgtaaaaactggaggccaacaaacagacacagaatgcaaggacaacaataccctggct
tcaaaactgtctgccaaaaaaagggcatcggtcggtggaactgagagtgatgattttcaa
gtagacaggaagaggattcgacctttagaaacagagcagcaggttagaaaacgtcactgc
ttttcaaaagaggtgcagctggttgatgctttagaagtttataatcagagaaaaaacggg
gagctgattgttcactgtgaaaaaagtgtgagaaacacgtctccccaaacgcttttcagc
ccttgcacggagtgttcctgttcctctggaaaagaaactcgtaaagatgctggtaacaca
aagaagaaagcaaatggagatcaaacattcattcccaaaatattttttggaacacgaaca
cacaaacaaattgctcagattaccagggagctgaagaggacagcgtattctggtgtctct
atgacaattctctctagccgggattatacctgtattcatccagtggtgtccaatagtagt
ggtaacaggaatgaactgtgtgtagaattactggaaggaaagaatggcaagtcctgcctt
tactatcatggtgttcataaactcagtgaacactttgccctgcattctgcacataacacg
taccaggcttgggacattgaggatctagtgagcctgggaaagaagcttcgtgcctgtcca
tactttgcagccagagaactcatggtgggggccgacattgtgttttgtccttataattat
ctcctagacccacagatacgggagagtatggaaattaacttgaaaggccaggtagtcatt
ctggatgaagcccataatattgaggatagtgctcgggaggcggtgagctacagtgttaca
gaaagtcaagtgaatgctgctcgagaagagctagatttcatggtcaataacaacatcagg
caaaaggatcatgagcagctacgggctgtgtgctactctttgacaaactggctacgggaa
agctctagtcagctggtagaaacagggtatgaaacctcctgcaaggtctggagtggaaaa
gaaatgctcaaccattttcatgaaatgggaataaccaatattagttttcctattttacag
aaacacctttctgctgtcttggaaaaagaagaaaaaatatccatgtttggtaaagaggaa
cttgtcgagatacctatagtgagctctgccactcagattgtgctgaaagggttattcatg
gttcttttctatctttttaaagataacagcaggtttgcagatgattacagagttgctttg
caacaaacttacgcttggacaaatgaaaaccaacctgacgtttcagatagcagtgctttc
tttacaaagaccaaacacaaaaggaatttgcgacataaaactgtagtccacatgcttaat
ttttggtgcttgaatcctgctgtggcattttcagacctaaatgatgtcagaacaattgtt
ctgacatctgggacactctctccaatggattcattttcttctgaacttggtgtgaagttt
tctattcagctggaggcaaatcatgttatccggaactcacaggtttgggttggcaccatt
ggagcaggcccgaatggtcggaagctgtgtgccacgttccagcatacagagacctttgag
ttccaagatgaggtgggagcacttctgctttcagtgtgtcaaaaagttggccaaggaatt
ttgtgtttcttgccatcctacaagctgttggacaaattgaaagatcgctggatacacact
ggcttgtggagaaacctggagcttgtcaagacagtcattgcagagcctcaaggaggagca
aaaagcgatttcgatgaactgctgaaaatatactacgatgcaataaaatttaaaggagaa
aaagatggagcactcctaatagctgtgtgcagaggaaaagttagtgaaggcttggatttc
tgtgatgagaatgcccgagcagttataaccataggtattccgtttccaaatgtgaaagac
cttcaggtcgaattaaagaggaaatacaatgatcagcacaaaactacaagaggcctttta
ccagggagccagtggtacgaaatccaagcttacagggctctgaaccaggccctgggaagg
tgtataaggcataggagtgattggggtgcccttatcttagttgatgaccgcttccggaat
aaccctaacaagtacataactggattatctaaatggattcgtcaacaagtccagcatcat
gaaaattttggtagtgcccttgaatccttacacgcatttgctgaaagaaaccagaaaggc
attgattgttcgtcacagtgtagcaatgaatttttccatgtacctttaaatgtgaaagag
ctgtcatcggcttctcaacaggaggcaactattcacctgtcaccagatgttcctgttaaa
agtgaggagcaaagtttggtccaagaaactcatttaactgcaaccatcgactcaattaat
cctgaaccatcaaatcagccacgtaatatcacagcaataatacaacaaagtggccagaaa
gttgatgtagagagtcattctcacaacgcaacacaaaggagaaaacatatggactccaca
cccagaaggcctgcaactaaaacagagaaaaagagtgattggactaattctgattttatg
aaagggcgctgctgctttaaaccactgacttcaacaccttcgcctgtagccatgaactgt
gtgtccacagcaagcagcgaacaaagggagaatgtgaacagagctagtgaacttattggt
ggtgtaaatcaatgccagtcatcattcactttagaacataaaccaaatatacgagaatca
catttggaaacaactaatttttcagtcaaaaatacagaggctcctgaggagcatcttgat
gagcaaaaacttcaaatcgaaccctgtagtgggcttccttcagtaggagggaaacctgaa
ttgtcagtgttagaaatgtcggcagaagctgaggatgaagatgagagtatttacttcaca
ccagagctttacgatggtgaagaatcagaggaagggaaaataaaagccccagatccagat
gagaatcagattgaatgtggaaaacccacagtagctgatgatctttttgtaatcaatacc
tcgaaaacactaaatgaaccaaaagaaattattaatgatgatggcagaaacagaagttta
catggaacgatgccgagtgatatcagtaagaacagtgcagttaatattgaaaagatgact
aatggaaaagaagcagatcaggtagaatctcaagaggtggacaccaagaaacggaaaatc
agtctttctagatcacgacataaaggattgaaagttcagagacagtacagaagaggaaaa
gctactgttagggcaagaggaaacacctgtgaaagaaagaaggaaaacaaacgaccttgc
aagagaggactttattgtattatctgcggggcagaaatactaccaaaagcagaaggcatt
ttgagaaaaacttgtcatggtgatattgagctgaaaataatcttgaaactcttcaaaaat
actcatgtaagaagtaaggaatccactaataaatgtacatgtaaactagatgtcacttca
gatgatgataacgtgatgttggtcatctcagatgttgcgagtctcagtcatcttaaggaa
actttgaagatttatcagacgccagtgaaaaacaaaggcacaaatgccagtttatcttta
aatgctgtttggaatgagaaggagtattctctgacaagttacttacagtgcaggaactgc
cttttccagtcagtgtctccatgccctttgataggagctgaggttactcatttcagcagt
gaagtacagtcatgggtctggctgctcccatcgtctgttcattattgcttactgctacag
agccctcagaaacggaaaacaggcaactcagattatactttatcttaa
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integrated database retrieval system
