Coturnix japonica (Japanese quail): 107322528
Help
Entry
107322528 CDS
T04297
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03030
DNA replication
cjo03420
Nucleotide excision repair
cjo03430
Mismatch repair
cjo03440
Homologous recombination
cjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107322528 (RPA1)
03420 Nucleotide excision repair
107322528 (RPA1)
03430 Mismatch repair
107322528 (RPA1)
03440 Homologous recombination
107322528 (RPA1)
03460 Fanconi anemia pathway
107322528 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107322528 (RPA1)
03032 DNA replication proteins [BR:
cjo03032
]
107322528 (RPA1)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107322528 (RPA1)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107322528 (RPA1)
DNA replication proteins [BR:
cjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107322528 (RPA1)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107322528 (RPA1)
MMR (mismatch excision repair)
107322528 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
107322528 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
RADX
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
107322528
NCBI-ProteinID:
XP_015736134
UniProt:
A0A8C2TJT8
LinkDB
All DBs
Position
19:4215191..4236633
Genome browser
AA seq
614 aa
AA seq
DB search
MSVRLSEGAIAAIMQGENIIKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNPLVEEERLSAHSICQVNRFIVNSLKDGRRVVILMDLDVLKTADMVGGTVGNPVPYNEG
QGQQRSSAPAANTAPNKPQQQNGSLSVAGSAAPKYHAPSNQFNKASAPSSVKTPGGTQSK
VVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYSAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFV
SISDLENTPKDSIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGN
EAEKFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGSASGVATNWKTLFEAKSERLGQGDKADYFSCVGTIVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADSLDYQWVTCFQESAEFILGQS
ATFLGELKEKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATALDVKPVNYREYS
KRLIASIRRNAQLG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaggctgagcgaaggagccatcgcggctataatgcagggagagaacatcatc
aagcccgtgctgcaagtcattaacacaagggctattgccacaggaaatgggcctccacgg
tatcgggtgctgatgagcgatggggtgaacactctgtcctcattcatgctggcgacacag
ctgaacccccttgtggaagaggaacgcttatcagcacacagtatttgccaggttaacaga
ttcattgtcaacagcttgaaagatggaaggagagtggttatactgatggatttagatgtt
ctgaaaactgctgatatggttggtgggactgttggcaatccagtgccgtacaacgaaggg
cagggacagcaacgttcttcagctccagcagccaacacagcacccaacaaaccacagcaa
cagaatggcagtttgtcagtagcaggttctgctgctccgaagtaccacgctccctcaaac
cagtttaataaagcaagcgctcccagctcagtgaagacaccagggggaacacagtccaaa
gtagtgcccattgccagcttgaatccataccaatctaagtggaccatttgtgctcgtgtt
acccaaaaagggcagatccgcacgtggagcaactcccgcggtgaagggaagctcttctct
atagagctggttgatgagagtggcgagattagagctactgcattcaatgatcaagcagac
aagttctttcctctgattgaactcaacaaggtatattattttaccaaaggcaatttgaag
actgctaacaagcaatattcagctgttaagaatgattatgagattacattcactaatgaa
acttcggttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgta
tccatctctgacttggagaacacaccgaaagactccattgtcgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattgtagtgaaagccagcaatagggaggtatcgaag
aggaatgtgcatctgatggatacatcagggaaactggtgacagctacgctatggggaaat
gaggctgagaagtttgatggttccagacaacccgtgatagccatcaaaggagcccgagtc
tctgattttggtggtagaagcctgtctgttctgtcatcaagtacagtggttgtcaaccct
gatagcccagaggctttcaagctccggggatggtttgactctgagggacagcttctggaa
tgtgcctccatctctgatgtgagaggtgggtcagcgtcaggggtagctaccaactggaaa
accttgtttgaagccaaatcagagaggttgggacaaggagataaggcggattattttagc
tgtgtgggcacaatagtacatctgcggaaagagaactgcatgtaccaggcctgtccctct
caggattgcaataagaaagtgatagaccaacagaatggactgtatcgttgcgagaagtgc
gatcgtgaattccccaacttcaagtaccgcttgatgctgctggtgaccattgcagactct
ctagattaccagtgggtgacttgtttccaggagtcagcagaattcattcttgggcaaagc
gctactttcctgggagagctgaaggaaaagaacgagcaggcgtttgaagaagtctttcaa
aatgcaaatttcaacacgtatgagttcaagatcagagtaaaactggagacgtacaatgat
gaatctcgtattaaggcaacagcactggacgtcaaacctgtaaactacagagaatacagc
aagaggttgattgcgagcatcaggagaaatgctcagctaggatga
DBGET
integrated database retrieval system
