Coturnix japonica (Japanese quail): 107322617
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Entry
107322617 CDS
T04297
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107322617 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107322617 (PRPF8)
Spliceosome [BR:
cjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107322617 (PRPF8)
Complex C
U5 SnRNP specific factors
107322617 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107322617
NCBI-ProteinID:
XP_015736302
LinkDB
All DBs
Position
19:complement(4141652..4159341)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPTPMAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcttcccgtaccgcggcggctgcgcgccggtaccgaccccgatggccccg
ctacctgactacatgtctgaggagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgccgagaagaggaaattcggcttcgtggacgctcagaaggaggac
atgccccccgagcacgtcaggaagatcatccgcgatcacggcgatatgaccaacaggaag
ttccgccacgataaacgggtctatctgggtgctttgaagtacatgcctcacgctgttctg
aagctcttggagaacatgcctatgccctgggagcaaatcagagatgttccagtcctgtat
cacatcacaggagccatctcttttgtcaatgagattccctgggttatagaaccagtgtac
attgcacaatgggggtccatgtggattatgatgaggcgagagaagagggacagacgtcac
ttcaagagaatgagatttcccccatttgatgatgaagaacctcctctggattatgctgat
aacattctcgatgtggagcctttggaagcaattcagcttgagctggatccggaggaagat
gccccagtactggactggttctacgaccaccagccactgaaagacaacaggaagtatgtg
aatggttctacctaccagcgctggcagttcactctgcctatgatgtccacgctgtatcga
ctggctaatcagctgctcactgaccttgtggatgacaactatttctatttgtttgacctg
aaagcgtttttcacctccaaggcactgaacatggctattcctggaggtcccaagtttgag
cctcttgttagagacatcaatctgcaggatgaagactggaatgaatttaatgacatcaac
aaaattatcatcaggcagccaatcagaacagagtacaaaattgctttcccgtacttatac
aataacctcccccaccacgtccacctgacctggtatcatactccaaacgttgttttcatt
aaaacagaagatcctgatcttccagctttttacttcgatccgttgatcaaccccatttca
cacagacattctgttaagagtcaggagccactgcctgatgatgatgaagagtttgagtta
ccagagtttgtggaacctttcttgaaggataccccactttacacagacaacacagccaat
ggcattgccctgctgtgggccccacggccattcaatctgaggtctgggaggactcggaga
gctcttgacatcccactggtcaagaactggtatcgtgagcactgcccagccggccagccg
gtgaaagtgcgagtctcctatcagaagctgctgaaatactatgttctaaatgccctcaag
cacagaccccctaaggcccaaaagaagaggtacttgttccgctctttcaaggctacaaag
tttttccagtcaacgaagctggactgggtggaagttggcctgcaggtgtgtcgccagggc
tacaatatgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattac
aactttaacctgaagccagtaaagaccctcaccactaaggaaaggaaaaaatcccgtttt
ggtaatgctttccatctgtgccgagaggttctgaggctgactaaattggtggtggacagc
cacgtccagtacagacttggaaatgtagatgcatttcagttggcagatggcttgcagtac
atctttgcccatgtaggtcagctgacagggatgtacagatacaagtacaaactgatgagg
cagattcgtatgtgcaaggacctgaaacatctcatctactacaggtttaacacggggcct
gtgggcaaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcacaccactgctagaacgctggctggggaatctgctggccagacagttt
gaaggccgtcactcaaagggtgtagcaaagactgtcacaaagcaacgtgtggagtctcac
tttgacctggagctgagggcagctgttatgcatgacattcttgacatgatgccagaaggg
atcaaacagaacaaagccagaaccatcctgcagcatctgagtgaggcatggcggtgttgg
aaggccaatatcccctggaaggttcctgggctgccaactcccattgagaacatgattctg
aggtatgtgaaggcaaaagctgactggtggacaaacacagctcactataacagagagcgt
atccgtcggggtgccactgtggacaagactgtctgtaagaagaatctgggccggctgacc
agactctacttaaaagctgagcaggagcggcagcataattacttgaaggatgggccttac
atcactgcagaagaggccgttgccgtgtacacaaccacagtgcactggttggaaagcagg
aggttctcacccattccattccccccactgtcctacaaacacgataccaagttgctcata
ctggccctggagaggctgaaggaagcttatagtgtgaaatctcgcctgaatcagtcacag
agggaggagctgggcttgattgaacaggcttatgataatcctcatgaagctctgtccaga
atcaaacgacaccttttaactcagagagccttcaaggaggttggcattgagttcatggat
ctctacagccacctggttcctgtttatgatgttgagcccttggagaaaatcacagatgct
tatctggatcagtacttgtggtatgaggctgataaaagaagactcttccctccgtggatc
aagcctgctgacactgaacctcctccactgttagtgtacaagtggtgccaaggcattaat
aatctgcaggatgtttgggaaacaagtgaaggtgaatgcaatgtgatgctggaatctcga
tttgagaagatgtatgagaagattgacctgacgttactcaacaggctgctgcgtcttatt
gtcgatcacaacattgctgactacatgacagcaaaaaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctatgggattattcgtggactgcagtttgcttccttcatt
gtccagtattatgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaa
atggctgggcctccccagatgccaaatgatttcctcagcttccaagacattgcaactgag
gtggcccatcccattcgccttttctgcagatacattgaccgcattcacatcttcttcagg
tttacagcagatgaggcaagggacttgattcagcggtacctgacagagcatccagatccc
aacaacgagaatattgtgggctacaacaataagaagtgctggcctcgggatgctcggatg
cgcctcatgaagcatgatgtcaaccttggccgtgctgtattctgggatatcaagaaccgc
ctgcctcgatccgtcaccacagtgcagtgggagaacagcttcgtgtctgtttacagcaag
gataaccccaatttgctgtttaacatgtgtggttttgagtgccgcattttgcccaaatgc
cgcaccagctatgaggagttcacccacaaggatggtgtctggaacctgcagaatgaggtc
accaaggagcgcacagctcagtgcttcctgcgcgttgacgatgagtctatgcagagattc
cataacagagtgaggcagatcctcatggcgtctggctcgacaaccttcactaagattgtc
aataaatggaatacagctctgattggcctgatgacatatttccgggaagctgttgtaaat
actcaggagctgcttgacttgttggtgaaatgtgagaataaaatccagactcgaatcaaa
attggtctgaattccaaaatgcccagtcgtttcccacccgtggtattctacacccctaaa
gagctgggaggtctgggtatgctctctatgggacatgttctcatcccacagtctgacctg
aggtggtccaagcagaccgatgttggcattactcatttccgctcagggatgagtcatgaa
gaggaccagctcatcccaaatttgtatcgttacatccagccatgggagagtgaattcatt
gattctcaaagagtgtgggcagaatatgctctcaaacgacaagaggctatagcccagaac
aggcgtctgacactggaagatctggaggactcatgggacagaggaattcctcgtattaac
acccttttccagaaggacaggcataccctggcttatgacaaaggatggagagtcaggact
gacttcaagcagtatcaggtcctgaaacagaacccattctggtggacacatcagcgccac
gatgggaagctgtggaacctgaacaactaccgcactgatatgatccaagctctgggtgga
gtggaggggatcctggagcacactctcttcaagggcacttacttccctacatgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaatcagattccaaacagaagatttactctgtggtggtctcct
accattaacagagccaatgtatatgttggcttccaggtgcagctggatttgactggtata
tttatgcatggcaagatccccacactgaagatttctctcattcagattttccgagctcac
ttgtggcaaaagatccacgagagcattgtaatggatttgtgtcaggtgtttgatcaggag
ctggatgctctagagattgagacagtgcagaaggagacaatccatcccaggaaatcatac
aagatgaattcctcatgtgcagatatccttctctttgcttcctacaagtggaatgtgtca
cgtccatcattgcttgctgattccaaagatgtgatggacagcaccaccactcagaagtac
tggatagatatccagctgcgctggggcgattatgattcccatgatattgagcgctatgca
agagccaagttcctggactacactacagacaacatgagtatctatccatctcccactggt
gtgctcattgccattgatttggcctataatttacacagtgcatatgggaactggttccct
ggtagcaaacctctgatccagcaggctatggccaaaattatgaaagcaaaccctgcgttg
tatgtgctgagagaacgaatccgcaagggcttgcagctgtactcatctgagcccacagaa
ccctacctttcctctcagaactatggagagctgttctccaaccagatcatctggtttgtg
gatgacaccaatgtgtacagagtgaccattcacaagacttttgaagggaatttgaccaca
aaacctatcaatggagccattttcatcttcaaccctaggactggacagctcttcctgaag
atcatccacacctctgtgtgggcaggacagaaacgtcttggacagctggccaagtggaag
actgctgaagaagtggctgccttgatccgctcgcttcctgtggaggagcagcctaagcag
atcatagtgactcgaaagggcatgttggacccccttgaggtgcacttgctggatttcccc
aatattgtcatcaaaggctccgagttgcagctgcctttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggctactgaacctcagatggttctcttcaatctctac
gatgactggctgaaaaccatctcttcctacacggcattctcacgtctgattctgattctc
cgggcactgcatgtgaataatgatagagccaaagttattctgaaaccagacaagacaacc
ataactgagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaagatctgatccttgctgactatggcaagaagaacaatgtgaatgttgca
tccctgacacagtcggagatccgagacatcatcctgggcatggagatctctgccccctct
cagcagaggcagcagattgcagaaattgagaagcaaaccaaggagcagtcgcagctgaca
gccacacagacccgcactgttaacaaacacggggatgaaatcatcacctccacaaccagc
aactacgaaacccagactttctcttccaagactgagtggcgagtcagagcaatttctgct
gccaacctccacctgagaacaaaccacatttacgtttcatcagatgacataaaggaaaca
ggctatacgtacattcttcccaagaatgtgttgaagaaattcatctgcatctcagatctg
cgagcccagattgcaggttacctgtatggagtgagccctcctgataatccccaagtgaag
gagatccggtgcattgtgatggtaccccagtggggaacacaccagactgtgcatctccca
gggcagctgcctcagcatgaatacctcaaggaaatggaacctctgggatggattcatacc
caaccaaacgagtccccccagctgtcaccacaggatgtcaccacccacgccaaagtcatg
gctgacaatccctcctgggatggggagaaaaccatcatcatcacctgcagttttacccca
ggttcctgcacgctgacagcctacaaactgaccccaagtggttacgagtggggcaggcag
aacacagacaaagggaacaaccccaagggctacctgccatcccactatgagagggtgcag
atgctgctctcagatcgcttccttggcttcttcatggttccagcacagggatcctggaac
tacaacttcatgggtgttcgccacgaccccaacatgaaatacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccttctcacttcctcaacttcgccctgctg
caggagggggaggtttactccgccgacagggaggacctctacgcctga
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integrated database retrieval system
