Coturnix japonica (Japanese quail): 107322780
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Entry
107322780 CDS
T04297
Symbol
SRSF1
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
cjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107322780 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107322780 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107322780 (SRSF1)
Spliceosome [BR:
cjo03041
]
Common components
Common spliceosomal components
SR proteins
107322780 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
107322780
NCBI-ProteinID:
XP_015736687
LinkDB
All DBs
Position
19:7448222..7452073
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AA seq
248 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
YRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagggggcgtgatccgcggcccggccggcaataacgactgccgcatctacgtg
ggcaacctgccccccgacatccgcaccaaggacatcgaggacgtgttctacaaatacggc
gccatccgcgacatcgacctgaagaaccgccgcggggggccgcccttcgccttcgtggag
ttcgaggacccgagggacgccgaggacgccgtgtacgggcgggacggttacgattacgat
gggtatcgcctccgcgtggagttccctcgcagcggccgggggaccggcagaggaggcggc
ggcggcggagggggcggagccccgcggggcagatacggccccccgtcccggcgatcggag
tacagagtgatcgtctcgggactgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgttttccgagatggaactggtgtcgtg
gagtttgtacggaaggaagatatgacctacgctgtgcgaaaactggataacactaagttt
agatctcatgagggagaaactgcctacatccgtgttaaagttgatggtccaagaagtcca
agctatggaagatctcggtcacgcagccgtagtcgtagcagaagccgtagtcgaagcaac
agcagaagccgcagttattccccaagaagaagcagaggatctccacgctactctccccgc
cacagcagatcccgatctcgtacataa
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integrated database retrieval system
