Coturnix japonica (Japanese quail): 107322854
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Entry
107322854 CDS
T04297
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107322854 (SOGA1)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107322854 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
TSC22
Motif
Other DBs
NCBI-GeneID:
107322854
NCBI-ProteinID:
XP_015736855
LinkDB
All DBs
Position
20:complement(2409425..2428512)
Genome browser
AA seq
1548 aa
AA seq
DB search
MSLELSGSDSESPGRAPPPPPSAGEASPLPEEPSAASMASSRLQLSTSLAFSDLTEELLD
AGTDGLLRELEDLRSENDYLKDEIEELRAEMLEMRDVYMEEDVYQLQELRQQLDQASKTC
RILQYRLRKAERRSLRVAQTGQVDGELIHSLEQDVKVAKDVSVRLHNELEVVEKKRIRLE
EENEDLRQRLIETELAKQVVQNEMDKLRENSLKKRGSRSIGKTEKKPSVQEDSADLKCQL
HFAKEESALMCKKLTKLAKENDGMKEELLKYRSLYGDLDSSLSVEELADSPHSREAELKV
HLKLVEEEANILSRRIVELEVENRGLRAEMDDMKGQGDRELPGQDLRFLACTSTCGDGGD
TVAELRRHLQFVEEEADLLRRSLLELEDQNKLLLNELNKYKSDHELDVTLSEDSCSVVSE
PSQEELATAKVQISELSGKVKKLQYENRVLMSNVQRCDLASCQTTRPMLETDAEAGDSAQ
CVPTAGWRDERGSEAEVQDRVLDGGSSSKLLKAKDLETLLGIRDQAALVSKAIDILISDA
NGFTSSLKVCLDNECVGGLLAEALDNSSESPSDAKLMNVLLMRLGVLQQDLGCFMRKVDL
LSSGLKEHSGSFHFSSSHEATKEGLQKEHGSDLQPDFRDADPYRITHTKDTDPTHSRSYK
TCRPDENDSYATEMKELQLVLSEANESLRGLQEQLSQERQLRKDEVDNFSQKICQLKEDH
QKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQFRQSFLLLFMKLKWFLKCWRQG
KTVHSEGDDFLEVNSMKELYMLLEEEELTPQQQADNRTCSGDAWTPNTPNECIKTLADMK
VTLKELCTELREERRGAGELQQQFTKAKAAWEMERAELKCHIAQLEAKAGKGITERTLPD
WKVALKREREEHQHLLAESYSAVMDLTKQLQISEKNWKQEKVELLARFKEEQQQAEQQAK
DLQNKLNQLQKGANPWALKHSEMEKHGSNWKEALNEKITDKETISEEDAKGTNLKRTKSV
SSMSEFESLLDCSPYLSGKTVPGLGDHSRGKKSSAASQLLPNGIRDSTGLPPPNCTYVNI
EQPVSDSLAKEKLGISSWDYSRASSLSGHDPAQKQMQRSYTAPDKTGIRIYYSPPVVRRL
EAAVVHNKEGKIMIEPGFLFTMAKPKEPEESARAESTYSQWLCNFSKQQRELLDSSTGES
TVPPVPRFPPSLHDLEISGNMSDDMKEITNCVRQAIRSSSLERKVKSTSSQTVGLAHVGT
QTTQTVSVGLQTDLPRGSLHGKSWSPRSSSLVSVRGKQISTSLDKVHARIERPCCSPKYG
SPKLQRRSSSKLDASKDRSLWNLHQGKQNGSAWARSTTTRDSPVLSNINDGLSSLFSVVE
HAGSTESIWKPGCPEGSRAKAEAPKYGLVQEFFRNVCGRAQSPTAPPEKKDAGGGEEGSK
KTEHSSLTSYHPTESTSRILSKKVLKQSSCEDPKLISPGQGSKEAFPRDPDFISAMANED
MACDCSSQSLTSCFARPSRSAARHSPSKCRLHPIDIPRAEEKPGPLSE
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggagctcagcggcagcgacagcgagtccccggggagagccccgccgccgccg
ccctcggccggggaggcctcgccgctgcccgaggagccttcggccgcatccatggccagc
agccgcctgcagctcagcacctcgctcgccttctccgacctcaccgaggaactgctggac
gccggcaccgacgggctgctccgcgagctggaggacctgcgctccgagaacgactatctg
aaggatgagattgaggagctgcgcgctgagatgctggagatgagagatgtctacatggag
gaggacgtctaccagctgcaggagctgcggcagcagctggaccaggccagcaagacgtgc
cgcatcctgcagtaccgcctgcgcaaggccgagcggcgcagcctgcgtgtggcacagact
ggccaggtggatggagagctcatccacagcctggagcaggatgtcaaggtggccaaggat
gtctccgtgcggctccacaatgagctggaggtggtggaaaagaaaaggatcaggctggag
gaggagaacgaggacctgcgccagcgactgattgagacggagctggccaagcaagtggta
cagaatgagatggacaagctccgagagaattccctgaagaaaagagggtctcgctccatt
gggaagaccgagaagaagccgtcggtgcaggaggacagtgcagatctaaagtgccagctg
cactttgccaaggaggagtcagccctgatgtgcaagaagctgaccaagctggccaaggag
aacgatggcatgaaggaggagcttctgaagtacagatccctctatggggacctcgacagc
tccctgtctgtggaggagcttgctgactcaccccactcacgcgaggctgagctcaaggtc
cacctcaagctggtggaagaagaagccaacatcctcagccgcaggattgtggagctggag
gtggagaaccgcggcctgcgggctgagatggacgacatgaagggccaaggggacagggag
ctgccagggcaggatctgcggttcctggcttgcacctcaacctgcggggatggaggggac
acggtggcagagctgcggcggcacctgcagtttgtggaggaggaggccgacctgctgcgc
cgctcattgctggagctggaggaccagaacaagctcctgctgaacgagctcaacaaatac
aagtcggaccacgagctggatgtgacgctgtcggaggacagctgctcggtggtcagcgag
ccatcgcaggaggagctggccacggcgaaggtgcagatcagcgagctgagcggcaaggtg
aagaagctgcagtacgagaacagggtcctgatgtccaatgtgcagcgctgtgacctggcc
tcctgtcagaccacccggcccatgctggagactgatgctgaggccggtgactcagcgcag
tgtgtgcccactgctggctggagggacgagcgtggcagtgaggctgaggtgcaggacagg
gtgctggatggcggttcaagcagcaagctgcttaaggccaaggacttggagaccttgctg
ggcatccgggaccaagcagctctcgtcagcaaagccattgacatcttgatttcagatgcc
aatggcttcacctccagcttgaaggtgtgcctggacaacgagtgcgtgggggggctgctt
gctgaggccctggataacagcagcgagagccccagcgacgccaagctgatgaatgtgctc
ctcatgaggctgggtgtgctgcagcaggacctgggctgcttcatgcggaaggtggacctc
ctctccagcggcctcaaagagcactccggctccttccacttctccagcagccacgaggcc
accaaagaggggctgcagaaggagcatggctctgacttgcagcctgattttagggacgcc
gacccttatcgcatcacccacaccaaggacacagaccccacacattcccggagctacaaa
acctgccgacctgacgagaacgactcctatgccaccgagatgaaggagctgcagctggtg
ctgtcagaagccaatgagagcctgagggggctgcaggagcagctctcgcaggagaggcag
ttgcggaaggacgaggtggacaacttctcacagaagatctgccagctgaaggaggaccac
cagaaagccctgctgcggcgtgagtttgaactgcagagcctcaacctgcagaggaggctg
gagcagaagttctggagccaggagaagaacctgctggtgcaggagtcgcagcagttcagg
cagagcttccttctgctcttcatgaagctcaagtggttcctcaagtgctggcgccagggc
aagacggtgcacagcgagggcgatgacttcctggaggtgaacagcatgaaggagctgtac
atgctactggaagaggaggagctcaccccgcagcagcaggcagataacaggacctgttct
ggggatgcctggactcccaacacgcccaacgagtgcattaagacgctggcggacatgaag
gtcaccctgaaggagctgtgcacggagctgagggaggagcggcgtggtgcaggcgagctg
cagcagcagttcaccaaggccaaagctgcctgggagatggagcgtgctgagctcaagtgc
cacattgcccagctggaggcaaaagcaggcaaaggcatcacggagcggacactaccagac
tggaaggtagcattgaagagggagcgcgaagagcatcagcatctcctggctgaatcctac
agtgccgtcatggacctgaccaagcagctgcagatcagtgaaaagaactggaaacaggag
aaggtggagctgctggcccgcttcaaggaagagcagcagcaggcagagcagcaagcgaag
gacctgcagaacaaactcaaccagttgcagaaaggagccaacccgtgggctctgaagcac
tccgaaatggagaagcatggcagcaactggaaagaggctctgaatgaaaaaatcacagac
aaagagacaatctctgaagaagacgccaagggaaccaacttaaaaaggaccaagtccgtt
tcctccatgtcagagtttgaaagcttgctcgactgttctccctacctctctggaaagact
gtgcctgggctgggtgaccattcccgaggcaaaaagtcatctgcagcctcccagctgctg
cccaacgggatccgggacagcaccggccttcctcccccaaactgtacctatgtgaatatc
gagcaacccgtctccgacagcctggccaaggagaagctgggcatctcctcctgggactat
tcacgggccagcagcctctcagggcatgacccagcccagaagcagatgcagaggagctat
acagcacctgacaagacagggatccgcatctactacagcccacctgtggtgcggcgcctg
gaggcagctgtggtgcacaacaaggaggggaagatcatgattgagcctggcttcttgttc
accatggccaagcccaaggagcctgaagagtcagccagggcagagagcacgtacagccag
tggttgtgcaacttctccaagcagcagcgagagctgcttgatagcagcacaggggagagc
acggtgccaccagtgccccgcttccccccctcactgcacgacctggagatctctggcaat
atgagtgatgacatgaaggagatcaccaactgcgtgcgacaggccatccgctccagctct
ctggagaggaaagtgaagagcacctcgagccagaccgtggggctggcccacgtggggaca
cagaccacacagacagtgagcgtgggcctgcagacagacctgccacgtggcagcctgcac
ggcaagagctggtccccgcgcagctcctcgctcgtctcggtgcgtggcaaacagatctcc
acctccctggacaaggtgcacgccaggatcgagcggccctgctgttcacccaagtacggc
tcaccaaagctgcagcggagatcttcctccaagctggatgcctccaaggacaggagcctt
tggaacctgcaccagggcaagcagaatggctccgcctgggcccgctccaccaccacccgt
gacagccccgtcctcagcaacattaacgatggcctgtccagcctcttcagtgtggtggag
cacgcgggcagcaccgagtccatctggaagccgggctgccctgagggcagcagggccaag
gctgaggctcccaagtacggcctggtgcaggagttcttcaggaatgtttgtgggcgggcg
cagagccccacagcccccccagagaagaaggatgctggtggaggggaggagggctccaag
aagaccgagcattccagcctgacttcctaccaccccaccgagagcacctcccgcatcctg
agcaaaaaagtcctcaagcaaagcagctgcgaggaccccaagctgatatcccctggccaa
gggagcaaagaggcattcccccgggaccctgacttcatctcagccatggccaacgaggac
atggcatgcgactgcagctcacagtccctcacctcctgctttgcccggccatcccgctcc
gccgcccgccactcgccctccaagtgcaggctgcaccccatagacatccccagggcggag
gagaagcccgggccgctgagtgagtga
DBGET
integrated database retrieval system