Coturnix japonica (Japanese quail): 107322874
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Entry
107322874 CDS
T04297
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107322874 (DHX35)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107322874 (DHX35)
Spliceosome [BR:
cjo03041
]
Complex C
Other components
Complex C specific factors
107322874 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
Cas3-like_C_2
AAA_19
UPF0203
Motif
Other DBs
NCBI-GeneID:
107322874
NCBI-ProteinID:
XP_015736884
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Position
20:3283958..3309567
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AA seq
712 aa
AA seq
DB search
MAAPVGPVKFWKPGTEGPGVSVSEERQSPAESSGVTVIYNPYASLSIEQQRQKLPVFKLR
NHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
ADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEG
RTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA
LSRSGMKKHLRVLPMYAGLPSPDQMKVFERVSRNVRKVIVATNVAETSITIHGIAYVIDC
GFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPKSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKLQAARQHRKFAV
EEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQ
TAKYYMRDVTSIESSWLVELAPHFYQQGTVRNRHKAQTHLSLKAKRAKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgggaccggtgaagttttggaagccgggcactgaaggtcctggcgtc
agcgtctcggaggagaggcagagtcctgcagagagcagtggtgtaactgtcatctataat
ccttatgcttctctgtctattgaacaacaaagacaaaagctgcctgtttttaagctcaga
aatcacatactttatctagtggagagctatcaaactctggtgattgttggagaaacagga
tgtgggaaatcaacgcaaattccacagtacctggcagaagctggctggacagccgaagga
agagtggttggggtgacacagcctcgtcgggttgctgctgtttcagttgcaggccgagtt
gctgatgaaaggggtgcagtgttgggtcatgaagttggatattgcattcgttttgatgac
tgcacagatccgcaggctacaagaattaagtttctaactgatggtatgctggtaagagag
atgatggctgatcctctgttaacaagatacagtgttctcatgctggatgaagcccatgaa
aggactctttatacagatattgccattggattactaaaaaagattcaaaagaagcgtgga
gatcttcgattgattgtggcctcagccaccttggatgcagagaaattcagggatttcttt
aaccaaaatgataccggtgaccccagcaaagataccagtgtgatccttactgtggagggg
agaacgtttccagtggacatcttttacatacagagtcctgttccagattatataaaatca
actgtggaaactgcaatgaaaattcaccagatggagaatgatggtgatatactggcattt
ttaactggccaggaggaagtggagactgttgtttctatgcttatagaacaggctcgggcc
ctttctcgctctggaatgaaaaagcatctccgtgttctccccatgtatgctgggctgcct
tctcctgatcagatgaaagtgttcgagagagtttctcgcaatgtcaggaaggtgatagta
gccaccaacgttgctgagacttctatcacaattcatggcattgcatatgtaattgattgt
ggttttgtgaagcttcgagcctataatccaaaaacagccattgaatgccttgtggtggta
ccggtatctaaagcttcagctaatcagagagcaggacgtgcaggccggaaccgctctggg
aaatgctacaggctttatacagaggaagactttgagaagttgcccaagtctacagttcct
gagatgcagcgcagtaaccttgcacctgtcatcttgcagctgaaggctctgggaattgac
aatgtgctcaggttccccttcctttcgccacctcctgcacagtcaatggtacaagcttta
gaattactgtatgctttaggaggtttggatatgcactgccgtttaactgagcctctggga
atgagaatagcagagtttcctctgaatccaatgtttgcaaagatgcttctggaatcagga
aattttggctgctcccaggagattttaacaattgctgcaatgatgcagattcaaaacatc
ttcttgatccctccaaatcaaaaattgcaagctgccaggcaacacagaaagtttgctgtg
gaggaaggtgatcatctcactatgcttaatgtttatgaagcctttgtcaaacacagcaaa
agttctcagtggtgtcaggaacactttctgaactacaaaggacttgttagagcttctgtt
gtaagagagcagctcaaaaagcttcttgtacgctttaaagtgccaaagaagtccagtgaa
ggtgatccagatcctgttctaagatgcatcgtttctggattctttgctaacgcagctaaa
ttccactctactggagcttacaggactatccgtgatgaccatgaacttcatatccaccct
acttcagtactgtatgcagagaaacctccacgctgggtcgtgtacaatgaagtcatacag
actgccaagtactacatgagagatgtgacttccattgaatcttcatggctcgtggaactg
gcacctcatttttaccagcaaggaacggtacggaatcggcataaagcccaaacgcatctc
tccttgaaagcaaaaagggctaaagtagatgaccactga
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