Coturnix japonica (Japanese quail): 107322994
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Entry
107322994 CDS
T04297
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107322994 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107322994 (TAF4)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107322994 (TAF4)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107322994 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
107322994 (TAF4)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107322994 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
107322994
NCBI-ProteinID:
XP_015737154
LinkDB
All DBs
Position
20:complement(6852466..6885843)
Genome browser
AA seq
1099 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSGGSGSSSPSPGGVVVGGSANAQTESGGGGGKMGLSAPELTKAGAGGVQGGVINHNTRS
QTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTVQ
TLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGPGSVGKGNTVNAVLPSASN
TVIQTSFLNTAVSSASSSSPTVISSQPPPSVGSGGPTVTLVRPPIHTAGPTVAAAGAATQ
NGSNTVINSTISVGSFPAVATATVGSGVSLQTTLVNSQSGSSVPAAPTTQVIKSESPKTI
VQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLTNVAPNPGGIPPAAPGTPTGMAKGTAN
TVAQTLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLL
MIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVQAPGTSIIARQVTPTTII
KQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATST
TATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEAEDFTSRLYRE
LNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLSPSVQRAA
GKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQPQKAGTLIRPPQVTLTQTPMV
ALRQPHSRIMLTTPQQIQLNQLQTVPVVKPTVLPGNKAIATVSTQVAAAQKNKLKEPGGG
SFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFSAPLQRRILEIG
KKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRAQLKF
FEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANL
TALAAIGPRKKRKVDSPGSGXGTQGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRDLIFC
LENERETSHSLLLYKAFLK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgatctggtgggttctttagagtctcagctggcggcctccggtcaccaccac
caacaccataaagcgcaggagcccctacgggccgctggggggctgttggggaaccatgtt
gtgagcggcggcagcggcagcagcagccccagccctggaggagttgtagtaggaggcagc
gcgaatgcccaaaccgagagcggcggcggcggcggcaagatgggactgagcgccccggag
ctcacaaaagcaggagcaggaggagtgcaaggaggtgttattaatcataacaccaggtcc
cagacttcagctctggatggagccaccacgacgagcaccagcaccaccactgcagcggca
ggaggatccgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggttatc
agcaccatggcgaccgccttgtccaccaggaatggcaagattgggaccacgacagtgcaa
actttgaatggtagtaatgtggtgatgaactctcaccacacaggaagtgctgctttctct
gggactcctgtgactgccaaccccgcttctgcacctgctgttgcccctcttgttaacaat
ggacctggatctgtgggaaaaggaaatactgttaacgccgttttgccatcagcttccaac
actgtcatccagacttctttccttaatactgctgtgtcctctgcatcttcctcctcgccc
acggttatctcttcacagcctccaccgagcgttggaagtgggggccctacagtcacgctc
gtgaggcccccgattcacacagcaggacccacagtagccgcagctggcgcggccactcag
aatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgttgct
acagccactgtgggatctggagtttccctccaaacaacacttgtgaatagtcagtctggt
tccagtgtgccagcagctcctaccacacaggtcatcaaatctgagtctcctaaaactata
gtacaggcagtatcccaacagcagacgctggctactgctggccagcccagtactacaggg
ggtaacatgattattgggcaaactatgcaagctgggctcaccaatgttgcccccaatcct
ggtgggatacctcctgcagcgcctggcacccctacgggaatggctaagggcactgccaac
acggtggcacaaactctaccgaggactccaacagcaactacgagtggaatcagagcaact
ttgactcctacagttttagcacctcgtttgcctcagccaccccagaatcccactaacatt
cagaattttcagttaccgccaggcatggtcctcgtgcgtagtgagaatgggcagttgctg
atgatccctcaacaagccttggcgcagatgcaagcacaggcacatgcccagtctcagcct
caaaatactatgactcctcgtcctgctacacctaccagtgctcctccagtgcagatatca
acagtgcaggctccaggaacgtctattattgcacggcaggtgacaccaactactattatc
aagcaagtgtctcaggctcaaacgacagtgcaacccacaacaacgttacagcgtcctcct
gttgtgcagcctcagattgttctgggtggtactgcacaaacaactacattggggacagca
acagctgtacaaactggaactcctcagagaacagtgcaaggaacaacagcaacctccacg
actgccacagaaactatggaaaatgtgaagaaatgtaaaaactttctatcgacgttaata
aaactggcatcatctggaaaacagtcctcagagacagcagctaacgtgaaagaattagta
cagaacctactggatggaaaaattgaagcagaagacttcaccagtaggctctacagagaa
cttaattcttcacctcaaccttaccttgtgccttttctgaagaggagtttacctgccttg
agacagttaacaccagactctgcagcttttattcagcaaagtcaacagcagcagccaaca
acgcaagcaacaactgcacttacagcagtgatgctaagcccttcagttcagcgcgcagca
gggaaggcaactgcaactgtaacaagtactctacaacaacctgtaatcagcctaactcag
cccacacaagttggtgttagtaaacaaggacagtcaacaccactggttattcaacagcct
cagaaagcagggacattgataaggcccccacaggtaacgttgacacagacaccaatggta
gcactgcggcaaccacacagtcgtattatgctcactactcctcagcaaattcaactgaat
caacttcagacagtacctgtggtaaaaccaacagtattacctggaaacaaagctatagcc
actgtttcaacacaagtagctgctgctcagaagaataaactgaaagaacctgggggaggt
tcttttagggatgatgatgacattaatgatgttgcatcaatggctggagtcaacctgtca
gaggaaagtgctcggatattggcaacaaactcggagctggtgggcacgttaacaaggtct
tgtaaagatgaaaccttcctcttctcagcacctttacaaagaaggatattagaaataggt
aaaaagcatggaataacagaaatccatcctgacgtagttagctatgtatcacacgctaca
caacaaagactacaaaacctcgtggaaaaattatcagagactgctcagcagaggaatatt
tcttataaggatgatgaaagatacgaacaagcaagtgacgttcgggcacagctcaagttc
tttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaaagggaaatctta
atgcgtgcagcaaagtctcgatctaggcaagaagatccagaacagcttaggctgaaacag
aaggccaaggagatgcagcaacaagagctagcacagatgagacagagggatgccaacctg
actgcattagctgcaattggtccaagaaagaaaaggaaagtggattcaccaggatctgga
tnagggacacagggatctggttcaagcgcagcagtcccaggcagctctggagttggaaca
accagacagtttacgcgacaaaggataacgcgggtgaacctcagggacctcatattttgt
ttagaaaatgagcgagagacaagccattcactattgctatacaaagcattccttaagtaa
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