Coturnix japonica (Japanese quail): 107323354
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Entry
107323354 CDS
T04297
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo00310
Lysine degradation
cjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107323354 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107323354 (PRDM2)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107323354 (PRDM2)
Enzymes [BR:
cjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
107323354 (PRDM2)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107323354 (PRDM2)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107323354 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2H2_11
zf-MYST
Motif
Other DBs
NCBI-GeneID:
107323354
NCBI-ProteinID:
XP_015737818
LinkDB
All DBs
Position
21:complement(4458165..4506958)
Genome browser
AA seq
1698 aa
AA seq
DB search
MNQNTTEPPAVVETLADVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPKKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAPGEELLVWYNGEDDPEIAAAIEEERASARSRRHSPKAKKGKKKTQESKN
KGRKATDTKQKKTDLDSSADMRDSKEGHKEDEKPSVSAVLSLEQTAVIQEMVNQDVLPKL
MIPSPASELQIVTEEKQEEAINCASDDLDEDEEEDEEEEEEEIEDTSMPKENAEMPLICE
EKLDSMEDQKSTSEESPESSPKKLVVKIPKARGESNGDVQESFMFPCQHCERKFTTKQGL
ERHMHIHISTVNHAFKCRYCGKAFGTQINRRRHERRHESGPKRKPFLTLTSSQHLDNVAD
NQVIVNDGLKDDLNVSSLVQDTVVLDSEKVSQEMSHSAFAEENKEPKELHPCKYCKKVFG
THTNMRRHQRRVHERHLIPKGVRRKGYFHEEPPLQTEQAPPVQSVYIASTEIEEEGEIDD
VYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMEANSADLYGLNCIISPVTVEISSN
IKITQTQVNEPPKEPSGSGSNESKKRRTASPPLVPKIKTEIEPEPITPTSSLNLPLSIST
ESLPFHKDKSVYLSSKLKQLLQTQDSKKITPSSEIPKLGPSVASSSILPPVPSRFKRRTS
SPPSSPQHSPVLRDFVKSGEGKTVWNDNLRSSKMPKLESHSNSPAWSLTGREEGETASPL
CFEDFKTSKDWTVAPTFGSVCNQQPLDLSSGVKQRSDIKNKHQVPWESVLDLSVHKKPCA
DAEIREYKENSIQPTCSSVKKKKPTTCMLQKVLLNEYNGMDAATDSTPSVNRSPSPSKSL
ESQAEPDTDPSLSALSSVDTQPLSSSVSLVPRASVVPSMCQLPPLLTPTNPPSPPPCPPV
LTVATSPPPLLPTMPLSIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPS
VEPLISAASPGPPTLSSSSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENT
LPVIKQEETENEPKAREDPRAASESGVMQETFNKSFVCNVCESPFLSIKDLTKHLSVHAE
EWPFKCEFCVQLFRDKTGLSEHRFLLHGVGNIFACSVCKKEFAFLCNLQQHQRDLHPDKV
CTHHEFESGTLRPQNFTDPSKANVEHMQSLSEDSLELSKEEEEDEDLNDSSEELYTTIKI
MASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRC
TKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVITGPGKNAFR
RMGQPKRLNFNVEISKMSSNKLKINALKKKNQLVQKAILQKKKSAQQKAELKNSLSDSDS
HICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKKSSKKGASSSPASSEKGSNQRRRTA
DAEIKMQGMQPHLGKTRARTSGPAQIQLPSASFRSKQNIKFVPPIRSKKPNPSSSLRNSS
PVRVSKMTHVDGKKTKVVGKNTSSGISSKATRKLHVRIQRSNKAVLPSRSAVASKKKADR
FTVKSRERIGGPITRSLQQAANAEAAENKKDESSTKQELKDFSYRLRTASRCPSSSSPNT
SARQCKKSSCTASPFFKE
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgagcctcctgctgtagtggagaccttggctgatgtacctgag
cacgtgcttcgggggctacctgaggatgtcaggctcttcccatctgctgttgacaagaca
aggcttggtgtttgggcaacaaagtcaattttaaaagggaagaaatttgggccttttgtt
ggcgacaagaaaaaaagatctcaagttaagagcaatgtatacatgtgggaggtgtattac
ccaaacctggggtggatgtgtgttgatgcaactgatccaaagaaagggaactggctgcgc
tatataaactgggcacggtcaggaaaggagcaaaacctgtttcctctggagatcaacagg
accatatactacaaaagtttaaagccaatcgcgcccggcgaggagctgttggtctggtac
aatggggaggacgacccggagatagccgctgctattgaggaagaacgagccagcgcccgg
agccggcggcactccccgaaggccaagaaaggaaagaaaaagactcaggaaagtaaaaac
aaggggaggaaagcaacagatacaaagcagaagaagactgatttggattcttcggcagat
atgagggattctaaagagggtcataaagaagatgaaaaaccttctgtttctgctgtactg
tctctggaacaaacagctgtgattcaggagatggtaaatcaagatgtacttccaaagctg
atgattcccagtcctgccagtgaactgcaaatagtgaccgaagagaaacaagaagaagca
ataaactgtgcatcagatgatttagatgaggatgaagaagaggatgaagaagaggaagaa
gaggagattgaagataccagtatgcctaaagaaaatgctgaaatgcctttgatatgtgaa
gaaaagttagactctatggaagatcaaaagagtacatcagaggaatctccagaaagctct
ccaaagaaacttgtggtgaaaattccaaaagcaagaggtgaatcaaatggtgatgttcag
gaatcattcatgtttccttgccagcattgtgagaggaagtttacaacaaagcaaggactt
gaacgccatatgcacattcatatatctactgttaaccatgctttcaaatgccgatactgt
gggaaagcctttggtactcaaattaacaggcgaaggcatgaacggcgccatgagtcaggg
ccaaaaaggaaacctttcttaacactaacatcatcacagcacttggataatgttgctgat
aaccaggtaattgtgaatgatggtcttaaagacgacttgaacgtttccagtcttgtacaa
gacactgttgtcttggattctgagaaagtctcccaagaaatgtcacactctgctttcgct
gaggaaaataaggagcccaaagaattgcatccgtgcaaatactgcaaaaaggtttttgga
actcacaccaacatgcggagacatcagcgcagggttcacgagcgtcatcttattcctaaa
ggggtcagaagaaaaggatactttcatgaagagccaccacttcaaactgagcaggcccca
ccagtgcagagtgtatatatagcaagtactgaaatagaagaggaaggtgaaatagatgat
gtctacatcatggatatttccagcaatatttctgaaaacttgaattattacattgatggt
aaaattcagtccaacagcagcactagcaattgtgatgtgattcagatggaggccaactct
gcagacttgtatggactaaattgtatcatcagtccggtcacagtggagatttcctcaaat
ataaagattacgcagacacaggtgaatgaacctcctaaggagccctctggcagtgggagc
aatgaatccaaaaagaggagaactgccagccctcctcttgtaccaaaaataaaaactgaa
atagaaccagaacctataactcctaccagttctttaaatcttcctcttagcatttcaaca
gagagcttaccttttcataaagacaaaagcgtttatttgtcatcaaaattaaagcagctt
cttcagacgcaggacagtaagaagataactccatcaagtgaaatccctaaactaggacct
tctgttgcatcatcatctattttgcctccggtacccagtagatttaaaagaaggaccagc
tctcctcccagttctccacagcacagtccagtacttcgagattttgtcaaatcaggtgag
ggaaaaactgtgtggaatgataatcttcgaagttcaaaaatgccaaagttagaaagccac
agcaactcacctgcttggagcctaactggaagagaggagggagagactgcgagccctctt
tgcttcgaagacttcaaaacatcaaaagactggacagtggctccaacctttggcagtgta
tgcaaccagcagcccctggatttgtctagtggtgtaaaacaaaggtctgatatcaaaaat
aagcatcaggttccttgggaatctgtattagatttaagtgtgcacaagaagccttgcgct
gatgccgaaattcgggaatacaaagaaaattccattcaaccaacctgtagtagtgttaaa
aagaagaaaccaaccacttgcatgttgcagaaagttctgctgaatgagtataatggcatg
gatgcagccacagacagcacacccagtgtgaacagaagcccgagcccaagcaaatccctg
gagtctcaggcagaaccagacacagaccccagtctgtctgcattgtcttctgttgacact
cagccccttagttcctctgtttcccttgtgccacgtgcatctgttgtaccttccatgtgt
cagctgcctcctttgttaacaccaactaatcctccttccccaccaccctgcccacctgta
ctaacagttgctacatcacctcctccccttcttccaacaatgcctttatcaattccagat
gtctctgctagtgccactaacacttcctcttgtccatcgccactttcaaacactactacc
cagtctccactaccagttctttcacctacagtttctccttctccatctcctgttccttca
gttgaaccactcatatctgctgcttcacctggtcctcctactctgtcttcctcctcttct
tcctcttcctcctcctcctcttcctccttctcttcctcctcctcctcctcatctccatct
ccccctcccctttcagtggtttcttccgttgtttcttctgctgataaccttgaaaatact
cttccagtaataaaacaggaggaaactgaaaatgagccgaaggccagagaagatcctcgt
gctgcaagtgaatcgggagtaatgcaggaaacattcaataaaagctttgtgtgcaatgtc
tgtgaatcaccttttctttccattaaagacctaactaagcatttatccgtccatgctgaa
gaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaacaggcttgtca
gagcatcgctttctgcttcacggagtaggaaatatctttgcttgctcagtctgtaaaaag
gaatttgcttttttgtgcaatttgcaacagcatcagcgagatctccatccagacaaagtg
tgcacacatcatgagttcgaaagcgggactttgagaccccagaattttactgaccccagt
aaggccaacgtagagcacatgcagagcctgtcggaagactctctagaactttctaaagag
gaggaagaagatgaagatctaaatgattcctctgaagagctttatactactataaaaata
atggcttctggggtaaaatctaaagatccggatgttcgtatgggcctcaatcaacactac
ccaagctttaaaccacctccatttcagtatcaccatcgaaatcctatgggtattggcgtt
actgcaacaaacttcactacccacaatatcccacagactttcactactgccatccgatgc
acaaagtgtgggaaaagtgtcgataacatgcctgagttacacaaacacatactggcctgt
gcatctgccagtgacaagaagcgatacacacccaaaaaaaatccagtaccactgaaacag
acagtgcagccaaagaatggcatggttgtcatcactggtcctggaaagaatgccttcaga
cgaatgggtcagccaaaaagacttaatttcaacgttgagattagcaaaatgtcttcgaat
aaactcaaaataaatgcattgaaaaagaaaaaccagctcgtccagaaagcgatcctgcaa
aagaagaaatctgcccagcagaaggcagaattgaaaaatagtctttctgattcagactct
cacatctgcccctactgtaatagagagtttacttacattggaagcttgaacaagcatgcg
tcgtatagctgtcccaaaaagcccatctccccctcctccaaaaaaaaatcatccaaaaaa
ggtgcaagttcatcacctgcaagcagcgaaaaaggcagcaaccagcgcagacgaacagca
gatgcagaaatcaaaatgcaaggcatgcagcctcacttgggcaagacgagagcgcgaacc
tcaggacctgcacaaatccagctgccctctgcgtccttcagatcaaaacagaacattaag
tttgtacctcccattcgatccaaaaagccaaatccgtcttcgtcattgaggaactctagt
cctgtgagagtgtccaaaatgactcatgtcgatgggaaaaagaccaaggtggtaggtaaa
aacacttcctctggcatctcaagcaaagccacccggaaattgcatgtcagaatacaaagg
agtaataaggctgttttgccgagtaggtctgctgtggcaagtaagaaaaaggcagacaga
ttcactgtaaaatctagagagaggattggaggacctattacacgaagcttacagcaggcg
gcaaatgccgaggcagcagaaaacaaaaaagatgaaagcagtacaaagcaagaattaaaa
gatttcagttacagactccgcacggcctctagatgtccctcctcctcttctcctaacacc
agcgccaggcaatgcaagaaatccagctgcactgcatcccccttcttcaaggaatag
DBGET
integrated database retrieval system