Coturnix japonica (Japanese quail): 107323498
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Entry
107323498 CDS
T04297
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjo04515
]
107323498 (CLSTN1)
Cell adhesion molecules [BR:
cjo04515
]
Cadherins
Cadherin related
107323498 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
107323498
NCBI-ProteinID:
XP_015738131
UniProt:
A0A8C2TGU9
LinkDB
All DBs
Position
21:complement(2966635..2998012)
Genome browser
AA seq
970 aa
AA seq
DB search
MPPPARCLLLLLLLCGGAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPL
RFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTI
QAYDCGKGPDGANAKKSHKATVHIQVNDVNEYSPVFKEKSYKATVIEGKRYDNILKVEAV
DADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLSYGKEHQYKLTVTAYDCGKKRAA
EDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPSMRLDTCDEPITSIQATVELETN
HIGKGCDRDTYSEKSIHRLCGAASGTAELLPSPSSAANWTIGLPTDNGHDSDQVFEFNGT
QAVKIPDGVVTVNMKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLV
FLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDGVSYDPFPVTEDY
PLHPSKIETQLVVGACWQEYTGNENDNETLPETSAGGELRMAQFFRGNLAGLMIRSGKLE
NKKVIDCLYTCKEGLDLQIADGVGKGVKIHMNPSQSAVTIEGDDIDRVDKAMQHISYLNS
RQFPTPGIRRLKITSTVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEF
ESSEGISLFPELRIISTITREVEPDGDGDEDPTVQESLVSEEIMHNLDTCEVTVVGEELN
QDQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHTASLFDRKF
KLVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPVHHTFVDLSGHNLANP
HPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQ
LEWDDSTLSY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccccgcccgctgcctcctcctcctgctgctgctctgcggaggagccgcggcc
gctcgagttaacaagcataagccatggattgaaacgacgtatcatgggatagtcacagaa
aatgataacacagttcttttggacccccctttaatagccctggacaaagatgcacctctg
cgttttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggatttaaa
attcatgggcaaaatgtcccctttgaagcagtggtagtggataaatccactggtgaggga
ataatacgctccaaagagaaactcgactgtgaactgcagaaggactacacgttcaccata
caggcctatgactgtgggaagggaccagatggagcaaatgcaaagaaatcccacaaagca
acagtacacattcaggtgaacgatgttaatgagtattctcccgtgttcaaagagaaatca
tacaaggcaaccgttattgaggggaagaggtatgataacatcctgaaagtggaagcggtg
gatgcagattgttcacctcagttcagccagatctgcagctatgaaatcgtaactccggat
gttcctttcgctattgacaaagacggttatataaaaaacacagaaaagttaagctatggc
aaagagcaccagtataaactgacagtaactgcatatgactgtgggaagaagagagctgct
gaagatgtattggttaaaattagtattaagcctacatgcaagcctggctggcaaggttgg
agcaaaagaatagaatatgaacctggtactggttctttagcactcttcccaagtatgcgt
ttggacacatgtgatgagccaataacctcaattcaggcaacagttgagctagaaaccaat
catattgggaaaggctgcgatagagacacctattctgagaaatccattcacagactctgt
ggtgcagcttctggcacagctgaattgcttccttctccaagtagtgctgcgaactggacg
ataggacttcctactgataatggtcatgacagtgaccaagtctttgagtttaatggcaca
caggctgtgaagattccagatggtgttgtcacagtcaatatgaaagaacccttcatgatt
tcagtgtggatgagacatggccctggaaccaaagagaaagagacaattctttgcaattca
gacaagacagatatgaatcgacaccactacacactgtatgtgcacaactgccgccttgtt
ttcctcttccggcaagatccttcagagggaaagacatacaagcctgcagaattccactgg
aagctaaaccaagtttgtgacaaggaatggcaccattacgtcctcaatgttgaatttcct
gcagtaacactttatgtagatggtgtttcatacgatcctttcccagtgactgaagattat
ccacttcatccttcgaaaatagaaactcagctggtagttggagcatgctggcaagaatat
acaggaaacgaaaatgacaatgaaaccctgcctgagacctctgcaggtggtgaactccgc
atggctcagttcttccgaggcaatctggcaggtttgatgattcgttctggtaaactggaa
aacaagaaagtgatcgattgcctgtacacctgcaaggaaggactggatttgcagattgct
gatggtgttggcaaaggcgtgaagatccacatgaaccctagtcagtcagcagtgaccata
gaaggggatgatattgacagagttgataaggccatgcagcacatttcctatctgaattct
cgccaattcccaacacctggaatccggaggcttaaaatcaccagtactgtcaagtgtttc
aatgaagaggcctgtgtctccattccttctgtggagggatatgtaatggtcttgcaacca
gaggaaccaaaaatcagcctgagtggcatcaaccattttgcccggtctgcttcagagttt
gagagttctgagggtatttccctcttccctgagcttcgtataataagcaccattacacgg
gaggtggaaccagacggagatggggatgaagatcctacagtacaagaatctttggtttct
gaagaaatcatgcataacctggatacgtgtgaggtgacagtggtgggagaagaattaaat
caggatcaggaaagcctggagattgacatgacacgattacagcagaaaggcattgagatg
agtagttccaaccttggcatgatcatcacaggagttgatactatggccagctatgaagaa
gttttgcatctgatacgctacagaaactggcacaccgcttctctttttgacagaaagttc
aaattggtttgttctgagcttaatggtcgctatgtcagcaatgagtttaaagtagaggtg
aatgttatccacacagctaaccctgttgaacacgctaatcacatagctgcacagccacag
tttgtacacccggtgcaccacacgtttgttgatctgtctggtcacaacctggcaaaccct
catccattttcagttgtgccgagtacagccactgttgtgattgtagtttgtgtgagtttc
ctggtttttatgattattctgggagtgttcagaatccgagctgcacatcagcgcacaatg
cgtgaccaggacactggaaaggaaaatgagatggactgggatgactctgcattgaccatc
actgtgaatcctatggaaacttacgaggatcagcacagcagtgaagaagaggaggaggaa
gaggaagaggaaagcgaagatggagaagaggatgacatcactagtgcagagtctgaaagc
agtgaggaagaggaaggcgagcaggaggaggaccaacagaatgttaatagacagcaacag
ctggaatgggatgactctaccctcagttattga
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