Coturnix japonica (Japanese quail): 107323519
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Entry
107323519 CDS
T04297
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107323519 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107323519 (EXOSC10)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107323519 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
GATA_AreA
Motif
Other DBs
NCBI-GeneID:
107323519
NCBI-ProteinID:
XP_015738189
UniProt:
A0A8C2U0D7
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All DBs
Position
21:complement(3548865..3562600)
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AA seq
908 aa
AA seq
DB search
MAAAVAEGNGCAVAGSSAAQGGKGGQGGPPVETERDGSTATVLPGFDDVDAFVKHALGTM
VATTKASSGLPQPGDEYDFYRSFPGFRAYCAAQGHRLLQCMSRVMQYHGCRSHMKDRSKV
TELEDKFDMLVDSNDIILERVGILLDEAAGVNKNQQPVLPAGLQVPQTIVSSWNRKAGEY
HKRSKSETFRLLHAKNISRPQLKFREKIDNSNTPFVPKLFIKPNALKPLAEALTKSGRER
KERPEDLDVPAALADFIHQQRTQQTEQDMFAHPYQYELEHFSPPDGVLQKPEPQMYRPIK
ETPCHFITTLDELVELNEKLMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLE
LRSDMSILNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGKHSLD
HLLKLYCSVDADKQYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKMREALWERGNEQPT
QLKVVWQRSRDICLKKYIKPLFSDESYLELYRRQKKHLNTQQLAAFRLLFAWRDKTARQE
DESIGYVLPNHMLLKIAEELPKEPQGIIACCNPVPPLVRQQINELHLLIQQAREMPLLKS
EIASTVKKRTYLSNSERLENTFFGPHDSSRIPMDDFQNNSALESTSAPVLERDSLFSDSE
TTMNIQGVQPESACLVATATVSIFSECDEDEGNEKVLTTAQKKAQRIMESFENPFRMYLP
SEQNPAYVSQSAKFDPSSKIYEISNRWKLMSKTQVQKESRDEAKKKAAQQAAARDQAQKV
YKEATENVVSVRQQAMQEQANRKRERVMSETGTELPKPEKKRPKASQQPEELEAPKQFTP
FDYSKFNFKVFAGSSKSKQSVQFDPARQVHTGKKFAGANKLQQPAGNRSMSYLAGKADRG
SKHHWPKR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgtggctgaggggaacggctgcgcggtagcggggagcagcgcggcccaa
gggggcaaaggggggcaggggggaccgcccgtggaaacggaaagagacgggagcacggcc
acggtgctgccgggattcgacgacgtggacgccttcgtgaagcacgccctcggcaccatg
gtggccaccacgaaggcatccagcgggctgccccagcctggcgatgagtacgacttctac
cgcagcttccctgggttcagggcgtactgtgcagctcagggacatcggctgctgcaatgc
atgagcagggtgatgcagtaccacggctgccgcagccacatgaaagaccgcagcaaagtc
acggagctggaagataagtttgatatgctggttgactccaatgacatcattcttgaaaga
gtgggtattttactggatgaagcagcaggagtgaacaaaaaccagcagcctgtccttcct
gctgggttgcaggtgccacagacgatcgtttccagctggaaccgcaaggcaggagaatac
cacaaaagatctaagtctgaaaccttccgactgctccatgccaagaatatctctcgccca
cagcttaagtttcgagaaaagattgacaattccaacactccctttgtacctaagcttttt
atcaagccaaatgctttgaaaccattggctgaagccctcacaaaaagcggacgggaacga
aaggaacgccctgaagatttggatgtcccagctgctttggcagacttcattcaccagcag
aggacgcagcaaactgagcaagacatgtttgctcatccgtaccagtatgagctggagcat
ttttctccaccagatggagttcttcagaaaccagaaccccagatgtacagacccatcaag
gaaacaccctgtcattttatcaccacactggatgagctggtagaactaaacgagaagctt
atgaactgtaaagagtttgctctggacttagagcaccattcctaccggagtttcctgggc
ttgacatgtctgatgcagatttccactcgaacagaagacttcattatcgatacgctggag
ctgcgcagtgacatgagcattctcaatgagaccttcacagacccagcaattgtgaaggtc
ctgcacggtgctgattcagatgtggagtggctgcagaaagactttggcctgtacttggtg
aacatgtttgatactcaccaagctgctcgtcttctcaatcttggcaagcactctttggac
cacttgctgaagctgtattgcagcgtggatgctgacaagcagtaccagttggctgactgg
aggatacgccctttgcccgaggaaatgattcagtatgcccgtgatgacactcactacttg
ctctacatttacgataaaatgagggaggcactgtgggagagaggcaacgagcagcccact
cagctgaaggttgtgtggcagcgcagcagagacatctgcctgaagaaatatatcaagccc
ctcttttcggatgaatcctaccttgagctctacaggaggcagaaaaagcatctcaacacg
cagcagctggcagcatttaggttgctgttcgcatggagagacaagacagcacgtcaggaa
gatgagagtataggatacgtgctaccaaatcatatgttattgaagatagcagaggagctg
cccaaagagccccagggtatcattgcttgctgcaatccagtcccaccgctagttcgccag
cagattaatgaactgcatcttctcattcagcaggcccgagagatgcctcttctcaagtcg
gagattgcttcgacagtcaagaaaaggacatatctctccaactctgagaggctggagaat
accttctttggaccacacgacagttcccggattcctatggatgattttcagaataattct
gctttagaatctacatctgcaccagtcttggaacgtgattctctcttttcagacagtgag
acaacgatgaatattcagggtgttcagccagagtcagcatgccttgttgctactgccact
gtcagcatattcagtgaatgtgatgaagatgaaggaaatgagaaggttttaacaactgca
cagaagaaagctcagcgtataatggagtcctttgagaatccatttagaatgtatttgcct
tcagaacagaatcctgcctatgtctcacagtctgcgaagtttgacccatcgtccaaaatt
tatgaaatcagcaatcgatggaagttgatgagtaagacacaagtacagaaggaatctagg
gatgaagcaaaaaagaaagcagcccagcaggcagctgctcgtgaccaggcacagaaggta
tacaaagaagcaacagaaaacgttgtgtctgttcgtcagcaagctatgcaggaacaagca
aataggaagagggagagagtcatgagtgaaacaggaacagaactgccaaaaccagagaag
aaacggccaaaagcctcccagcaaccagaggagctggaagcaccgaagcagtttaccccc
tttgattacagcaagttcaacttcaaagtgtttgcgggaagcagcaaatcgaagcagtca
gtacagtttgatcctgccagacaagttcacacaggcaagaaatttgctggagctaacaaa
cttcaacaaccggctggaaaccgaagcatgtcctacctggcagggaaagctgataggggt
tccaagcaccactggccaaagagatag
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