Coturnix japonica (Japanese quail): 107323743
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Entry
107323743 CDS
T04297
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107323743 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107323743 (POLB)
Enzymes [BR:
cjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107323743 (POLB)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
107323743 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
107323743 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF6932
Motif
Other DBs
NCBI-GeneID:
107323743
NCBI-ProteinID:
XP_015738583
LinkDB
All DBs
Position
22:complement(4110454..4118148)
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQESLNQGITDFLMELANYERNVSRAIHKYNAYRKAASAISRYPSRIQSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINFLTRVTGIGPAAARKFVEEGIK
TLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVKNLDPDYIATVCGS
FRRGAESSGDMDVLLTHPTFTSESSKQSKLLHKVVEQLEKVHFVTDVLSKGDTKFMGVCQ
LPNKEDGASYPHRRIDIRLIPKDQYYCGVLYFTGSDLFNKNMRAHALEMGFTINEYTIRP
LGVTGVAGEPLPVECEEDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaagcgccgcaggagagcctgaaccagggcatcacggacttcctcatg
gagctcgcgaattacgagcgcaacgtgagccgggccatccacaagtacaacgcgtacagg
aaagcggcctccgccatctcccggtaccccagcaggatccagagcggagccgaagcgaag
aagctggatggagtaggtgctaaaatagctgagaaaatagatgagtttttatccactgga
aagctccgcaagttggaaaagattcgacaagatgatacaagtgcttccatcaacttcctg
acacgagttactggaattggtcctgctgccgctaggaagtttgtagaggaaggaattaag
actttagaagatctaagaaaaaatgagcacaagctgacccatcaccagcgaattgggttg
aaatactttgaagattttgagaaaagaatcccaagggaagaaatgttgcaaatgcaggaa
atcgtgctgaaagaggtaaagaacttggacccagattatattgctacggtctgtggcagt
tttagacgaggtgcagagtcaagtggagacatggatgttctcttaacccatccaactttc
acatctgaatcatccaaacagtcaaagcttctgcataaagttgtagaacaattggagaaa
gtccactttgtcactgatgtgctgtctaaaggtgacaccaaattcatgggtgtctgccag
ctgccaaataaagaagatggagcatcttatccacacaggagaattgatattcggcttatc
cctaaagatcagtattactgtggtgtactgtatttcacaggcagtgatttattcaataag
aacatgagagcccacgctctggaaatgggcttcacaatcaacgagtacacaatccgtccc
ttgggtgtcactggagttgctggggagcccctaccagtagaatgtgaggaagacatcttt
gactacatccagtggaaataccgggagccaaaggatcggagcgaataa
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