Coturnix japonica (Japanese quail): 107324107
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Entry
107324107 CDS
T04297
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X2
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04140
Autophagy - animal
cjo04148
Efferocytosis
cjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107324107 (VPS11)
04148 Efferocytosis
107324107 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107324107 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107324107 (VPS11)
Membrane trafficking [BR:
cjo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107324107 (VPS11)
Hops complex
107324107 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
BLOC1S3
zf-ANAPC11
zf-RING_11
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
107324107
NCBI-ProteinID:
XP_015739284
LinkDB
All DBs
Position
24:complement(34856..43028)
Genome browser
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRELVKEPPGLDGGGGKPFALPPGITVCDSGRGSLVFGDMEGRIWFL
PRSLQLSGFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYLLSVKDYSHLELDTHGCGLHCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGSEAQNSDKQVL
NIYDLCNKFIAYSSIFDDVVDVLAEWGSLYVLTRDGKIHVLQEKDAQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSTKLEEFIKASESEVRFDVETAIKV
LRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALHYIGKLPFDQAESNMKRYGKIL
MHHVPKETTELLKNLCTDYRPSGDSEGSGILEGKKANSEEFIPIFANNSRELKAFLEHMT
EVQSDSPQGVYDTLLELRLQNWAHELDKQIKEKLHDEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
DCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDGQR
IQKYREETTRIRKEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLQCSNDGFSVVADYFGRGVFNKLTL
ITDLPLGKSATTIEAGLQRELLMHAKRNT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcaatggcgccgcttcgtgttcttcgacagggagctggtgaaggag
ccgccggggctggacgggggtggagggaagcccttcgcgttacctccgggcatcacggtc
tgcgactcgggccggggaagccttgtgttcggagatatggaaggtcggatctggtttttg
cctcgctcacttcaactcagtggtttccaagcttacaagctaagggtaacgcacctgtac
cagctgaagcagcacagtatcttggtttctgttggtgaggatgaagagggcattaacccg
ttggttaaagtatggaatttggagaaacgtgatggtggcaatcctctttgcacacgaatt
ttcccagcaatcccgggtaacaagcccacagttgtgtcctgtctaactgtccatgagaat
ctgaatttcatggctattggttttgcagatgggagtgttgtacttacaaaaggagacatc
actcgagaccgacatagtaagacccagatcctccatgaaggcagttacccagtaactggt
cttgcttttcgacagtctggcaaaacgacacatctgtttgtggtgaccacggagaacatc
cagtcttacctgctttctgtgaaagactattctcatctggagctggacactcatggctgt
ggattgcactgttcttctctgagcgacccctctcaggacctccagttcattgtagcagga
aatgagtgtgtgtacctctatcagccagatgaacgaggcccctgctttgcttttgaggga
cagaagctgattgttcactggtaccgggggtacctcatcattgtctccaaggaccgaaag
acttctccaaagtcagagtttgctgggagtgaggcgcagaattcagacaaacaagttctg
aatatctacgacttgtgcaacaaattcattgcatacagctcaatctttgatgatgtagta
gatgtcttagcagagtggggttctttgtatgttctgaccagagatgggaagatccacgta
ctgcaggagaaggatgcccaaaccaaactcgagatgctcttcaggaagaacttatttgaa
atggccattaatctagccaagagtcaccacctggacagtgacggcctgtcagaaattttc
cggcagtatggtgatcatctctataacaaggggaaccatgatggagccatccagcaatat
atccgaactatagggaaactggaaccatcttatgttattcggaaattcctagatgcacag
cgcatccacaatctcactgcttatctgcagacactccatttgcaatctcttgccaatgca
gatcatactacgcttctgctaaactgctatactaaactcaaagacagcaccaagttggag
gagttcattaaggctagtgagagtgaggtccgttttgatgtggaaacagcaatcaaggtg
cttcgtcaagcaggttactactcccatgctgtatacttggcagaaaagcatgcccatcat
gaatggtacctcaaaatccagctagaagacattaagaactatcaagaggctttgcactac
attggaaaactgccttttgatcaagctgagagtaatatgaagcggtatggtaagatcctg
atgcaccatgtccctaaagagacaacagaactgttgaagaacctttgcactgattaccgg
ccatcaggagatagtgaaggctctgggattctggaaggaaaaaaggcaaattctgaggag
tttattccaatctttgcaaacaactcccgagaactgaaggcttttctggagcacatgact
gaggtgcagtctgactctccacaaggtgtctatgacactttattggaacttcgcctccag
aactgggcacacgaactagataagcagatcaaggagaagctgcatgatgaagcactcact
ctcctgaagagcggaaggttcaaaacagtctttgataaggccttggtcttatgtcagatg
cacaatttcaaggatggtgtcctctacctctatgaacagggcaaacttttccaacagatc
atgcactaccacatgcagaacgagcagtacaagaaagtgatcgaggtgtgtgagttgtac
ggggaccaggaggcttgtctttgggaacaggctcttggctactttgcacggaaggaggaa
gactgcaaggagtatattgctgcagtgctgaaacacatagagaacaagaatcttatgcct
ccacttcttgttgtacagacactggctcacaactccacagccacattatctgtgattaag
gattatcttgtcaacaagctgcagaagcagagctgccagatagagcaagatgggcagaga
attcaaaaataccgagaagaaactacaaggatccgtaaggagattgaagagctgaaagca
agtcccaagatctttcagaagaccaagtgcagcatttgcaccagtgccctggagctgccc
tcagtccacttcctgtgtggccattccttccaccagcactgctttgaaagctactctgag
agtgattcagagtgtcccacttgtatgcctgaaaatcgcaaagtgatggacatgatccga
gcccaggagcagaagagagatctgcacgatcagttccagcatcagctgcagtgctccaat
gacggcttctctgtggtcgctgactacttcggtcggggcgtttttaacaagctcaccctg
atcacggatctgccgttggggaagtcagctacgaccatcgaggctggtctgcagcgggag
ctgctgatgcacgctaagcgcaatacctga
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