Coturnix japonica (Japanese quail): 107324215
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Entry
107324215 CDS
T04297
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04270
Vascular smooth muscle contraction
cjo04625
C-type lectin receptor signaling pathway
cjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107324215 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107324215 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
107324215 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107324215 (ARHGEF12)
Membrane trafficking [BR:
cjo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107324215 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDZ
PDZ_6
SOS1_NGEF_PH
Ribonuc_2-5A
Mga
DUF3967
Motif
Other DBs
NCBI-GeneID:
107324215
NCBI-ProteinID:
XP_015739525
LinkDB
All DBs
Position
24:complement(3140519..3197218)
Genome browser
AA seq
1440 aa
AA seq
DB search
MRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDL
AAFGHMSPIMTSPHSPGASGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQSL
QEEYGRSASSRLLREIQETKKHITQLQEQLSKATGCAQDGVLSSRSVAESLQVSEVEAES
GDALSKLDYSSDSPSRPNSDIADSPRSGLKERVYLDESPEKTEIQDTDSQSSIGSPSSRV
GPQIIGAEDDDFDTEQEQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLY
TDLYKQTNAKETRRVFLEFYQFFLDRAANLKVPIPDEISIDLEKRRPELIPEELHRHYIQ
TMQDRVCPEVQRNLEDFRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKI
EEVLMTSQPLEEDKSSTIQYVILTYMKHLGVKAKEARNLEQKRGRIGFLPKIKQSIKKEK
EGDEKGKRRGFPNLLGPPRRPSRHDSSAIGRAMEIQKQRHQKHIPAVPSVSPEPPDLGKV
RQSGSSSEGTDAPYPPANPMSPLAVGPFSSPEGNKDSESGSKQTGEAPPANECVDGTPRT
PSTTFEFPSPLENLPEEEGESERVVDMGTPKPFRKVDSVGFADVQSEDELYDFDMDTDPP
NWQQLVSREVLMGLKPYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSD
KKKIFSNLEDILGLHVALNDQMKAVRKRNETSVIDQIGEDLLSWFSGAAEEKLKHATATF
CSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNI
AKYTELPEEKEKVKKAADHCRQVLNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMM
DEFRNLDLTKRKMLHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILA
STADSKHTFSPIIKLNTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLI
AQMAGNVKMESSRRVIPLPQSGPGEEEREEEEQQKLKDQHDIPASSLQSPDKDLGLDSPL
ILNAQTSPTMSEKSEVESLLVAERQFDKVQQADLAMKESSPCYEHTATNLPLVSGGQWAL
DALRNLDLLKKLLVQQLGFAEKGTLEDRQRFPRFRTVSQEAQTEGGSELGLQHSDNNKFH
QPGADPTLPRSGTNEPTAHYGLRTSAESPAPGDAMQLGARDPRPSSSLAMDRVGMNLEVS
ATELEGVGADESGEHFFDAREAHSDENPSESELMERKDEEDVQIRISGNYLILDGYEAVQ
ESSTDEEVSSLVLQGAAGGRTSLDSAQQQPLSPRDTQSDGGSSPFAEEMMVTRWGGVEEP
CTVVANPPFWSIESHAQMMQYIQKIENDLEKLKEVEEDYIILRRQGLAGSASTGEHSEKS
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctggagtgcaaacgggtgatagaattatcaaggtgaatggcactctcgtaaca
cactcaaaccatttggaggtggtaaagctgatcaagtcgggttcctatgtagctctcact
gttcaggggcgcccaccagggtcgccccagattcccttggctgattctgaagtggatctg
gcagcatttgggcatatgtctcccatcatgacatctccccattcgcctggagcatcagga
aatgcagaaaggattactagcccggtgcttatgggggaggagaataatattgtccacaac
cagaaagtggagattctgagaaagatgctacagaaagagcaggagcggctgcagtctctt
caagaagagtacggccggtctgccagctcacgactgctcagagagatacaggaaacgaag
aagcacattactcagctgcaggagcagctgtccaaagccacaggctgtgctcaggatgga
gttttgtcctccaggtctgtggcagaatcgctgcaggtcagtgaagtggaggcagagagt
ggggatgctctgagcaaactggattacagtagtgacagcccctctcgaccaaacagtgat
attgctgatagtcctcgcagtggcctgaaggagcgggtttatctggatgagagcccagag
aagactgagattcaagatactgattctcagtccagcattggaagtccttcatcccgtgtg
gggccacagatcattggagcagaggatgatgactttgacactgagcaggagcagataaat
ggacaatgcagttgtttccaaaacattgagctcctgaagtctcgcccggctcacctggct
gttcttctgcaccatgtggtgtcccagtttgaccctgcagcattgttgtgctacctttac
acagacttgtacaagcagaccaatgcgaaggagactcggcgtgtcttcctggagttttac
cagttcttcttggaccgagctgcaaatcttaaagttccaataccagatgaaatctccata
gatctagagaaaagaaggccagaactcattcctgaagagcttcatcgacactatatacaa
actatgcaagatagagtctgtccagaagttcagaggaatctggaagacttcaggcagaaa
cgtagcatggggttgaccctggcagagggggagttgaccaagttggatgcagaaagggtt
cgtgaccggaatgcggtggagaaggaaagagcatgtgcagaacagattattgccaaaatt
gaggaagtcttgatgacatctcagcctttggaggaagacaagagttccaccatacagtat
gtgattcttacttacatgaagcacctgggagtcaaagctaaagaggctcggaacctggag
cagaagcggggccgtattggtttcttgccaaagatcaagcaaagtatcaagaaagagaaa
gaaggcgatgaaaaaggaaagaggagaggctttcctaatctcttgggcccaccgaggaga
ccaagccgacatgacagcagtgcaattggcagagccatggagatacagaagcagcgccat
caaaagcacatccctgcagtgccttctgttagcccagagcctccagatttgggcaaggtg
cgccagagtgggtcctccagtgaaggcacagatgcgccgtacccacctgccaacccaatg
tctcctttggcagtgggtcctttttcatctccagagggaaacaaggacagcgaatcaggc
tcgaagcagacaggagaagccccacctgctaatgagtgtgtggatggcacaccccgcaca
cccagtactacttttgaattcccatctcccttggaaaacttgccggaggaggagggagag
tcagagagagtggtcgacatggggacaccaaagccttttcgcaaggtggacagcgttggt
tttgcagatgtacaaagtgaagatgagctgtatgactttgatatggacacagaccctccc
aactggcagcagcttgtgagccgagaagtgctgatggggctgaaaccttatgagatcaag
aggcaagaagtgattaatgagttgttttacactgagagagctcacgtccgcaccctgaag
gttctgcataacgttttctaccagcgtgtcacccgggaagggatcctcaactccagtgat
aaaaagaagatcttttcaaacctggaggatatcctggggcttcatgttgcattgaatgat
cagatgaaagcggtccggaaaaggaatgagacttctgttattgaccaaattggggaggat
ttgctttcttggttcagtggagcagcagaggagaagctgaaacacgccactgccacgttc
tgcagtaaccagccctttgctctagaggtcataaagtcccgtcagaagaaggactctcgt
ttccagacttttgtgcaggatgctgagagtaatcccctgtgtcgccgcctgcagctgaag
gatatcattccaacagagatgcagaggctgacaaagtacccccttctgctggataacatt
gccaagtacacagaactgcctgaagagaaggagaaagtgaagaaagcagcagatcattgc
cgtcaagtccttaaccacgtgaaccaggctgtcaaggaatcagagaacaagcagcatctg
gaagattatcagcgtcgtcttgacctgtcctacttaaagcagtctgaggatcccatgatg
gatgagttcaggaacttggatctcaccaagagaaaaatgcttcacgaaggacctctgact
tggaaggttaatcgtgacaaaactatcgatctctacactctgctcttggaggacattctg
gtgctgttgcagaaacaagatgataagctggtcttgaagtgtcacagtaaaatcttggcg
tcgacagctgatagcaagcacaccttcagtcctatcatcaaactgaacactgttctggtt
cgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtcagaaaacggtgct
cacatttacgagctggtggcacagacagtttcagaaaagaacgtatggcaggaccttata
gctcagatggcagggaatgtgaaaatggagagtagcagaagagtgattccattaccacag
tcgggacctggcgaagaagagcgtgaagaagaagaacagcagaagctcaaagaccagcat
gacattcctgccagtagcctacaaagcccagacaaagatctgggcctagactctccattg
atactgaatgctcagacttcacccaccatgtctgaaaagtccgaggtggaaagtcttctc
gtggcagagaggcagtttgataaagtgcaacaggcagacctggccatgaaggagtcttct
ccgtgctatgaacacacagccaccaatttacctttggtatcaggagggcagtgggcattg
gatgcgttaaggaacctggacttgctgaaaaagctgttggtccaacagcttggctttgct
gagaaggggacccttgaggaccggcaacgctttcccaggttcaggaccgtctctcaggag
gctcagacagagggtggaagtgagcttggacttcagcactccgacaataacaaatttcac
cagcctggagcagaccccacgcttccaagaagcggaactaacgagcccacagctcattat
ggcctccggacttcagctgaatcaccagctccaggggatgccatgcagctgggagcaaga
gaccccaggcccagcagtagcttagcgatggaccgcgtgggtatgaatctggaggtctcc
gccacagagctggaaggggtgggtgctgatgagagtggggagcatttctttgatgcccga
gaagctcacagtgatgaaaatccatctgaaagtgagctaatggaaaggaaggacgaggag
gatgtgcaaatacggatctcaggaaattatttgatccttgatggatatgaagcagtgcag
gagagctccacggatgaggaggtgtcgtctctggttctccagggtgctgcaggtggtcgc
acctctttggactctgcacagcagcagcccctctccccacgggacacgcagtcggatgga
gggagctccccatttgcagaggagatgatggttacccgctggggaggagtggaagagccc
tgcacagttgtagcaaaccctcccttctggtctatagagtcacacgcgcagatgatgcag
tatattcagaagatagagaatgaccttgaaaagttaaaggaggttgaggaagactacatc
attctccgtcgccaagggctggctgggtcagcctccacaggagagcactcagagaaaagt
tag
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integrated database retrieval system
