Coturnix japonica (Japanese quail): 107324642 Help Entry 107324642         CDS       T04297                                  Symbol SKIV2L Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism cjo  Coturnix japonica (Japanese quail) Pathway cjo03018   RNA degradation Brite KEGG Orthology (KO) [BR:cjo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     107324642 (SKIV2L)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cjo03019]     107324642 (SKIV2L) Enzymes [BR:cjo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      107324642 (SKIV2L) Messenger RNA biogenesis [BR:cjo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      107324642 (SKIV2L)   mRNA degradation factors    3'-5' decay     Ski complex      107324642 (SKIV2L) SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD MTR4_beta-barrel Ski2_N DEXQc_Suv3 Helicase_C MTR4-like_stalk ResIII AstA_C Motif Other DBs NCBI-GeneID:  107324642 NCBI-ProteinID:  XP_015740324 LinkDB All DBs Position 26:884258..896260 Genome browser AA seq 1239 aa AA seqDB search MELERIALPPPGPLHLPLALLELGCAGRYELLPGPAPPRSTLPQGLPPFAPSLTEELEQR FLGTPSWLPPHQHERAQRCWTRVPNPRALFVLEPTPVHSSMRALRDPGTGALQGFIEELH EDSGLTSSPDTSNVPQWEGGLEEPPLELLHTQGPNEENLDFENDLLTIPPGLKRGVEFQP RAPGARGGAPSLCSVLGALDSLELERAEEEEKKEGEAAGGGAPSQPPPDKGGLPSPTPPL RRADSLEELVMGEVLVPPTTATPPALPQSEEEEWAVEEDCSVPVENFEEKIPDPAFKWPF RPDAFQQRAALCLERGQSLLVAAHTSAGKTAVAEYAIALARRHMTRAIYTSPIKALSNQK FRDFRATFGDVGLLTGDVQLRPDASCLIMTTEILRSMLYNGSEVLRELEWVIFDEVHYIN DAERGVVWEETLILLPEHVGLVLLSATIPNALEFAQWVGRTKRRRLRVLSTRRRPVPLEH YLYTGGGGPPSPHDLFLLLDASGGFSTQGYYAAVEAQKQRASKHSQSFGAKQPHGGGSGP GQDRAMWHSLVALLQAQGQLPAVAFTFSRGRCDANATALGRIDLSSAAEKGRVRSFVRRC LARLRGGDRCLPQVLQMSELLERGIGVHHSGVLPLLKEVVEMLFSQGLVKLLFATETFAM GVNMPARTVVFDSIRKHDGNNFRDLLPGEYVQMSGRAGRRGLDRTGTVIILCRGTVPDMA DLHRVMLGRPSGLQSQFRLTYGTILSLQRAAALSVEGLMRNSFGEFPLRRRAAAQQRRVA ELQQELAALGEPPDKETLDDLPQYHEAVQGLLEARAELQRRVAQSVAGLKALAPGRVVVV CTPQHRNALGLILQVTAESGGGRTITTMVLSEKPPEEGGPSPSPPPDAPYPEDVLLSRLF LPEGPPGAALEQLHPEDLGGIVGRTLRANPPRLLEELRRRQTARGRKDPPSPELLSALQE LLRMAGGAPGGLPLLDPVGALQLRDPPAVEAAARARSLGAALGGFRCVHGPRFPQLYSQF AARRRLQDQVEQLQYQLSDRSLLLLPEYRQRLGVLQALGYVADGGAVQLPGRVAALLSCH ELLLTELLLGNVLSPLRPEEVAALLSCTVHPGRGEPPPKLPPNLQKGMEQIRAVAERVGR LQEEWGLPQSAEDYVGQFGFGLAEVVYEWARGMPFAALAALAPLQEGVVVRCIQRLEELC RELRRAARMLGDPGLAATMEAASGCIKRDIVFAASLYIQ NT seq 3720 nt NT seq  +upstreamnt  +downstreamnt atggagctggagcggatcgcgctgcccccccccggcccgctgcacctccccctggcgctg ttggagttgggctgtgccggtcgctatgaactcctgccgggtcccgccccgccccgcagc acgctcccccagggcctcccaccctttgctccttccctgacagaggagttggagcagcgc ttcctgggaaccccctcctggctgcccccacaccagcatgagcgggctcagaggtgctgg acacgggtgcccaacccccgggcactgtttgtgttggagccaaccccggtgcacagcagc atgcgggcgctgcgggatcctggcacgggggcactacagggcttcattgaggagctacat gaggactcagggctcacatcttccccagacaccagcaacgtcccccagtgggaaggcggg ttggaggaaccccccctggaattgctccacacccaggggccaaatgaggagaatttggac tttgaaaacgatttactgaccattccccctggcttgaaacgtggtgttgagttccagccc agagcccctggagctcggggaggggcaccatcactctgtagtgttttgggggcattggat tccttggagttggagagagcagaagaagaggagaaaaaagagggggaggctgctgggggg ggtgccccctctcagccccctcccgacaaaggagggctgccttcccccacaccccccctg cgccgtgctgacagcctggaggagctggtgatgggggaggttctggtgccccccaccaca gccaccccccctgccctcccccaaagtgaggaggaggagtgggcagtggaggaggactgc agtgtccctgtggagaactttgaggagaagatcccggacccagcattcaagtggccgttc cgccccgatgcgttccagcagcgtgcagcgctgtgcctggagcggggccagtcgctgctg gtggccgctcacacctctgcaggcaaaacagctgtggctgaatatgccatcgcattggca cggcgacacatgacacgggccatctacacatcacccatcaaggcgctctccaatcagaag ttccgggacttcagggccacctttggtgatgtggggctgctgacaggggatgttcagctg cgtccagatgcctcctgcctcatcatgaccactgagatcctgcgctcaatgctgtacaat ggctctgaggtgcttcgtgagctggagtgggtcatcttcgatgaggtgcactacatcaac gatgccgagcgcggtgtggtgtgggaggagacgctgatcctgctgcctgagcacgtgggg ctggtgctgctcagtgccaccatccccaatgcccttgagtttgcccagtgggtcggccgc acaaagcggcgccgcctgcgtgtgctgagcacacggcggcgcccagtgcccctcgagcac tatctctacactggaggcggtggacccccctcaccccatgacctcttcctgctgctggat gcatcgggtggcttcagcacccaggggtactacgcagcggtggaggcacagaagcagcgg gcgagcaaacactcacagagctttggggccaagcagccccatgggggaggcagtggccct gggcaggaccgtgccatgtggcactcgctggtggcgctgctgcaggcgcaggggcagctc ccggccgtggccttcaccttctcccgcgggcgctgtgatgccaatgcaaccgctttgggc cgaatcgacctcagctcagctgcagagaagggacgcgtgcggagcttcgtgcggcgctgc ctggcccggctccgggggggggatcgctgcctgccccaggtgctgcagatgtcggagctg ctggagcgcggcatcggggtgcaccacagcggggtactgccgctgctcaaggaggtggta gaaatgctcttcagccaggggctggtcaagctgctcttcgccactgagaccttcgccatg ggggtgaacatgccggcacgcaccgttgtctttgattccatccgcaaacacgatgggaac aacttccgtgacctgctgccaggcgagtacgtgcagatgtcgggacgtgccgggcgccgt gggttggaccgaaccgggactgtcatcatcctgtgccgggggacggtgcctgacatggcc gacctgcaccgcgtcatgctgggccgcccgtcggggctgcagtctcagttccgcctgaca tatggaaccatcctcagcctgcagcgtgcggccgcgctcagtgtggaggggttgatgcgc aacagcttcggggagttccccctgcggcgccgcgctgcggcgcagcagcggcgcgtggct gagctgcagcaggagctggcggcactgggagagcccccagataaggagaccctggatgac ctcccccagtaccacgaggccgtgcaggggctgctggaggcgcgggcagagctgcagcgc cgcgtggcgcagtctgtggcagggctgaaggcgttggccccaggaagggtggtggtggtc tgcaccccccagcaccgcaatgcactgggcctcatcctgcaggtgactgctgaaagtggg gggggccgcaccatcacaacaatggtgctgagtgagaaaccccctgaggagggggggccg tccccctcaccccccccggacgccccctaccccgaggatgtgctactgagcagactcttc ctgcctgagggcccccccggagctgcactggagcagctgcaccctgaggacctggggggc atcgtggggcgcacactgcgggcaaaccccccccggctgctagaggagctgaggcggagg cagacagcacggggaaggaaggacccccccagcccggagctgctctcagccctgcaggag ctgctgcgcatggcagggggggctccaggggggctgcccctactggacccagtgggagcc ctgcagctgcgggacccccctgctgtggaggcggccgcccgagcccggagcctgggggca gcccttggggggttccgctgtgtgcatggcccccgctttcctcagctgtactctcagttt gctgcccggcgccgcctgcaggaccaggtggagcagctccagtaccagctgtcggaccga tccctgctgctgctgcctgagtaccgccagcgccttggtgtcctgcaggctctgggctac gtggccgatggtggtgcggtgcagctcccggggcgtgtggcagcgctgctgagctgccat gagctgctgttgacggagctgctgctgggcaatgtgctgagcccgctgcgccctgaggag gtggccgcgctgctgtcctgcaccgtgcacccgggccggggcgagccgccccccaaactg cctcccaacctgcagaagggcatggagcagatccgcgccgtggccgagcgtgtggggagg ttgcaggaggaatgggggctgccccagagcgccgaggactacgtggggcagttcggcttc gggctggccgaggtggtgtacgagtgggcacgcggcatgcccttcgccgctctggctgcg ctggccccgctgcaggagggtgtggtggttcgctgcatccagcggctggaggagctgtgc cgggagctgcgccgcgctgcacggatgttgggagacccgggactggcggccacgatggag gcggcgagtggctgcatcaaacgggacatcgtgtttgctgcgagtctttacatccaataa

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