KEGG   Coturnix japonica (Japanese quail): 107324680
Entry
107324680         CDS       T04297                                 
Symbol
SNRPE
Name
(RefSeq) small nuclear ribonucleoprotein E
  KO
K11097  small nuclear ribonucleoprotein E
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107324680 (SNRPE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjo03019]
    107324680 (SNRPE)
   03041 Spliceosome [BR:cjo03041]
    107324680 (SNRPE)
   03032 DNA replication proteins [BR:cjo03032]
    107324680 (SNRPE)
Messenger RNA biogenesis [BR:cjo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     107324680 (SNRPE)
Spliceosome [BR:cjo03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107324680 (SNRPE)
  U2 snRNP components
    107324680 (SNRPE)
 Complex B
  U1 snRNP components
    107324680 (SNRPE)
  U4/U6.U5 tri-snRNP components
    107324680 (SNRPE)
 Complex C
  U2 snRNP components
    107324680 (SNRPE)
DNA replication proteins [BR:cjo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107324680 (SNRPE)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 107324680
NCBI-ProteinID: XP_015740392
LinkDB
Position
26:2017306..2019595
AA seq 92 aa
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcgtatcgagggcagggccagaaggtgcagaaggtgatggtgcagcccatcaacctc
atcttccgctacctgcagaacaggtccaggatccaggtgtggctttatgagcaggtgaac
atgcggatagaaggctgcatcattggcttcgatgaatatatgaacctggtgctggatgat
gcagaggagattcactccaaaacaaaatcaaggaagcagctgggtcggatcatgttaaaa
ggagacaatatcactcttctacaaagtgtttctaactag

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