Coturnix japonica (Japanese quail): 107324910
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Entry
107324910 CDS
T04297
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X1
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107324910 (DDX20)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107324910 (DDX20)
Spliceosome [BR:
cjo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
107324910 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SiaC
AAA_30
AAA_22
CMS1
Motif
Other DBs
NCBI-GeneID:
107324910
NCBI-ProteinID:
XP_015740830
UniProt:
A0A8C2U254
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All DBs
Position
26:3412593..3418059
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AA seq
767 aa
AA seq
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MAAPVEGRFRTRDVLLPGGPSDFGSLLLSPPVLEGLEAAGFHRPSPVQLKAIPLGRCGLD
LIVQAKSGTGKTCVFSTIALDSLLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLE
CHVFIGGTPLSQDKVRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGS
FQEQINWIYSSLPANKQMLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYK
IVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISG
SMNQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLDWETYMHRIGRAG
RFGTLGLSVTYCCRGEEENMMMKIAQKCNLRLLPLPEPIPPGMMDQFEDWDVEVKPVVHT
GASVNSDTVCLKPEEPVLQPVQNNSTEVPQPPSNLPVGNSSEEKPKDALEQKQVKKYTNS
AKVGKSSRNSQTSNCNTKQKNQVEAVSRTAEQSNTEVPDEEAFKRNLPRIPCLSSFKNQQ
SSPWSFSDFVEDYEYFIKEGLERDVEIVRSYSGPGDQRELPRNGGIEWKEVEHNRDTVAN
DLLSDDSDSSYSSMASSHSSENNSCIEAYSDRQVKSDVPTACQDLTGFCPTPEKLKEPSQ
VPKQNQVKKKALKQNAKEKKKHSYQYTDTGPRKTGDDCSCGSWDDGVPDFPHEMWSYEDY
WKSYYQAWQNYYAAVSHFHYRRSYRHLMWMNAYVNSVYFQELLEGGD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgttgaaggccggttccgcacccgcgatgtgttgctgcccggtggcccg
tctgatttcggctcgttgctgttatcgcctccggttctggaggggctggaggcggctggc
ttccatagaccgtctcctgtgcagctaaaggccattccgttggggcgctgtgggctggat
ctcatcgtacaggccaagtccggtaccggtaaaacctgtgtcttctccaccatcgctttg
gattcgctgctgctggacagcccggccacgcaggttcttatcttggctccaactcgagag
atcgctgtgcagattcatgctgttatcacaaccattgggatcaaaatggaaggtttggaa
tgccatgtcttcattggaggtactcctttgagccaggataaagtccggctaaagaaatgc
cacatagcggttggctctccaggtcgaataaaacagctcatagagttggactacttgaat
actgccagtatccggctcttcattcttgatgaagcagacaagctgctggaagaaggcagc
tttcaggagcagatcaattggatttactcttcactgccagccaataaacagatgcttgct
gtttcagctacttaccctgaatcgttagctaatgcattgacaatgtacatgagagaacca
acgtttgtgaggttgaatcctactgatcctagtctcattgggctgaagcagtattataaa
atagtgaattcgcatccacttccacataaaacatttgaggaaaaaacccagcacctgcaa
gagttgttcagcaagattccatttaatcaagcattggtcttctcgaatttgcatagcagg
gctcaacatctagctgaaatactaacatccagaggctttcctgctgagtgcatttcaggc
agcatgaatcaaagccagcggcttgatgctatggctaaattaaagcaattccactgtaga
gttctgatatccacagacttgacgtcgcgtggaattgatgctgaaaaggtgaatctggtc
atcaatctggatgttcctctagactgggaaacatacatgcatcgtattggcagagctggc
cgctttggaactttaggtttatctgtgacctattgctgccgtggagaggaggaaaacatg
atgatgaaaattgctcagaaatgtaacctacggcttcttcctttacctgagcctattcct
cctggaatgatggatcagtttgaagattgggatgttgaagtcaagcctgttgtacacaca
ggggcttctgtgaattctgacaccgtgtgtcttaaaccagaagaaccagtacttcagcct
gtccaaaataattctacagaggtacctcagcctccttctaaccttccagttggtaattct
tctgaagagaagccaaaagatgctttggaacaaaagcaggtgaagaaatacacaaattct
gctaaggtgggaaaaagcagcagaaactcccaaacctccaactgcaatacaaagcagaaa
aatcaggtagaagctgtttccagaacagctgagcagagtaacacagaggttccagatgag
gaagccttcaaaagaaatctgcccagaattccatgcttatcatccttcaaaaaccaacag
agcagtccttggagcttttcagactttgttgaagactatgaatactttattaaggaaggg
ttggagagagatgttgaaattgtaagaagctattcaggcccaggagatcaacgtgaactc
cccagaaatggtggtatagagtggaaagaggtggaacataatagagacacggtagcaaat
gatcttctgtctgatgacagtgattcttcatacagttcaatggcttcctctcacagtagt
gaaaataactcatgtattgaggcatattcagacaggcaggtaaagagtgatgtccccact
gcctgtcaggatcttacaggcttctgtcccacaccagagaagctgaaggagccctcacaa
gtcccaaagcaaaatcaggtgaaaaagaaagctctgaaacaaaacgccaaagaaaagaaa
aagcattcctatcagtatactgatactggcccaaggaaaactggagatgactgctcctgt
ggctcttgggatgatggtgttcctgactttcctcatgagatgtggagctatgaagactac
tggaaatcttactatcaagcatggcagaactactatgctgcagtttctcactttcactac
aggagaagttacaggcacttgatgtggatgaatgcttacgtcaactcagtgtactttcag
gaactgctggaaggtggtgattaa
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