Coturnix japonica (Japanese quail): 107325015
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Entry
107325015 CDS
T04297
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjo04990
]
107325015 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
cjo04990
]
Other domain-containing proteins
Patched domain-containing proteins
107325015 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
107325015
NCBI-ProteinID:
XP_015740954
UniProt:
A0A8C2YEZ2
LinkDB
All DBs
Position
1:107280488..107314660
Genome browser
AA seq
914 aa
AA seq
DB search
MVLRGPWGSRGGPGAALALLRAIRTRMLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVL
ISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIV
HVLEELKAARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYY
LQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLIT
SLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPF
VMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTARFSEDTTDSEETNTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISF
ALMGYLQVSEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQED
VLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYAS
SVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMV
DMDSTRVVDQITTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgcgggggccgtgggggagccgcgggggccccggagcggcgctcgccctcctg
cgcgccatccgcactaggatgttgcggcaggtcttgcacagggggctggggacgtccttc
tcccggctcggccacttcgtcgccagccacccggtgttcttcgcttcggcgcccgtgctc
atctccatcctgctgggcgccagcttcagccgctaccaggtggaggagagcgtggagcac
ctcctggcccccacccacagcctggccaagatcgagcggaacctggtggacagcctcttc
ccggtgaaccgctccaagcaccggctctactccgacctgcagacgccggggcgctacggc
cgggtgatcatcacctccttccgcaaggccaacatgctggaccagcaccacaccgatctc
atcctcaagttgcactctgctgtgaccaggatccaagtgcaaagacctggtttcaattac
acgtttgcccatatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtg
catgtgctggaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcact
tatccgattactcacttaaaggatggcagggaagtgtataacgggcatcagcttggtggg
gttactgtgcacagcaaagaccgggtgaagtctgcagaagccattcagctcacctactac
ttgcaggcaatcaactccttgaatgacatggtggcagaaaagtgggaatccattttttgt
gacactgttgaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttct
tcttcgctgaaggaggatttccagaagacgagcagggtgtcagaacgctacctgatcaca
agcttggtccttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgc
agcaaaccctggcttggcctgctgggattgctgaccgtgacccttgccaccctgactgca
gccgggatcatcaatctcactggtgggaaatacaattccaccttcctggggatccccttc
gtcatgttaggtcatgggttatatgggacttttgaaatgttgtcctcctggagaaaaact
agagaagaccaacatgttaaagagaggactgcagccgtatttgcagactccatgctctcg
ttttccctcaccactgccatgtacctggtcacttttggaataggtgccagtcccttcact
aacattgaagcagccaggattttctgctgcaattcctgtattgcaattttcttcaactac
ctctatgtactctccttttatggttccagcctggtgtttactggctacatagaaaacaac
taccagcatagtatcttctgtagaaaggtaccaaagccagaggtattgcaagagaagcct
gcatggtataggtttcttctgacagccagattcagtgaggacacaacggattcagaggaa
acgaacacttacgagagtcatcttttggtgtggttccttaaacgctattattgtgactgg
ataacaaacacttacgtcaagccttttgtagttctcttttaccttgtttatatttccttt
gccttaatgggctacctgcaggtcagcgaagggtcagacctgagcaacatcgtagcgacc
gccacacggaccattgagtatacaactgcccagcagaagtatttcagtaactatagcccg
gtgattgggttctacatctacgagtcgatagagtactggaacaccagtgtccaggaggac
gtgctggagtataccaagggctttgtgaggatatcttggtttgagagctacttaaattac
cttaggaaactcaacatatctactggattgcccaagaaaaatttcactgatatgttgagg
aactccttcttgaaagctcctcagtttgcccatttttcagaggatatcatcttttccaag
aaatacaacaatgaagttgatgtcgtggcctccagaatgttcctggtggccaagacaatg
gaaactaagagggaagaactttatgacctcctggaaaccctgaggaagctttcgctcacc
tccaaggtgaaattcatcgttttcaatccatcgtttgtgtacatggatcgttatgcctct
tcagtgggagcccccttacaaaactcctgcatcagtgctttatttctgctcttcttctct
gcattcctggtggcagactctctgatcaatgtatggctcactctaactgttgcctcggtt
gagtttggagttataggttttatgaccttgtggaaagtggaactagattgtatttctgtg
ttgtgcttgatttacggaattaattatacaattgacaactgtgctccactgttatcaacc
tttgtcctgggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcat
ggggtagctattttgcagagctacctctgctatattgttggtctgattcctcttgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcacc
ttctttcactgctttgccattttacctgtgatattgacttttctgccaccgtccaagaag
aagaggaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtg
gatatggatagcactcgagtggttgaccaaattacaacagtctaa
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