Coturnix japonica (Japanese quail): 107325046
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Entry
107325046 CDS
T04297
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107325046 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107325046 (SMARCD2)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107325046 (SMARCD2)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107325046 (SMARCD2)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107325046 (SMARCD2)
PBAF complex
107325046 (SMARCD2)
GBAF(ncBAF) complex
107325046 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
107325046
NCBI-ProteinID:
XP_015741017
LinkDB
All DBs
Position
27:complement(1251225..1263549)
Genome browser
AA seq
503 aa
AA seq
DB search
MAARGAFPLSPLPPSGSAAPPPPGPGPGMMRGPNPTPASGAAPGYRPMGPSGAQYQRPGM
PPGSRMPMAGLQVGPPGAPPYGAASPLRPGLPQSMMDPFRKRLLAPQSQPPMATQRRGVK
RRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRI
YISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGPD
NHLVEWHRLPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTR
ASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPII
INHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESIN
QLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAVG
RHIFAKVQQRRQELEQVLGIRLT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgtggagctttccctctcagccctctgcctccctccggctccgccgctcct
cctcctccagggcccggacccggtatgatgagaggccccaacccgactccggcctccggg
gccgctccgggatatcgtccgatggggccttcgggagcgcagtaccagcgccccgggatg
ccaccaggcagccgtatgcccatggcagggctgcaagtgggacctccaggagcaccccca
tatggagcagcatccccactgcgacccggcctgccacagtccatgatggatcccttcagg
aagcgtctgctggctccccagtcccagccacccatggccacccagaggagaggggtgaag
aggaggaagatggctgacaaagtcctgccacagaggatccgggagcttgtcccagaatct
caggcctacatggacctcctggcctttgagcgcaagctggaccaaaccatcgctcggaag
aggatggagattcaagaggccatcaagaaaccactgacgcaaaagcggaagctgaggatt
tacatctccaacactttcaccccggccaaagaagaaggggagggtggtgagcgtgtggcc
tcttgggagctacgcgtggagggcaaactgctggaggacccaagcaaacagaagaggaag
ttctcctcctttttcaagagcctcgtcatcgagctggacaaagagctgtacgggccagac
aaccatttggtggagtggcaccgtctgcccacgacccaggagactgatggcttccaagtg
aagcgtcctggcgatgtcaatgtgaagtgcaccctgctgctgatgctggatcaccagcca
ccacaatacaaactggaccctcgcctggctcgcctgctgggggtgcacacccagacccgt
gccagcatcatgcaggcgctctggctgtacatcaagcacaacaagctgcaggacagccac
gagaaggagtacatcaactgcaaccgctacttccgacagatcttcaactgtgtccgtatg
cgcttctctgagatccccatgaagttagcagggctcctgcagcacccggatcccatcatc
atcaaccacaccatcagcgtggaccccaatgaccagaagaagacggcctgctacgacatc
gacgtggaggtggatgatcccctgaaagctcagatgagcaacttcttggcttccaccacc
aaccagcaggagatcgcctcactggatgccaagatccatgagaccatcgaatccatcaac
cagctgaagacacagcgtgatttcatgctgagcttcagcaacaacccgcaggatttcatc
caggagtggatcaaatcacagaggagggacctcaagatcataacagatgtgattgggaat
cctgaggaggagcgacgagctgagttttaccaacagccctgggcccaggaggctgtgggc
agacacatctttgccaaggtccagcagcgtcggcaggaactggaacaagtgcttgggatc
cgcctcacttaa
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