KEGG   Coturnix japonica (Japanese quail): 107325375
Entry
107325375         CDS       T04297                                 
Symbol
LSM7
Name
(RefSeq) LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03018  RNA degradation
cjo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107325375 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107325375 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjo03019]
    107325375 (LSM7)
   03041 Spliceosome [BR:cjo03041]
    107325375 (LSM7)
Messenger RNA biogenesis [BR:cjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107325375 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107325375 (LSM7)
Spliceosome [BR:cjo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107325375 (LSM7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 107325375
NCBI-ProteinID: XP_015741629
UniProt: A0A8C2Y7P0
LinkDB
Position
28:complement(195477..198164)
AA seq 186 aa
MPGPPRRRPLLFLTGPGRAPSAPGIPATHPGSRPGSSAPDIEYRKSHLGAPQGANGLSGS
ETSLPVAVNEMANVGGGGGGASKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVL
KGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPF
IQQQDG
NT seq 561 nt   +upstreamnt  +downstreamnt
atgccgggcccgccgcgccgccgcccgcttttgtttctgaccgggccgggccgggcccct
tccgcaccgggtatcccagcaacacaccccggaagtcgccccggaagttccgccccagac
atcgagtacaggaagtcgcaccttggcgctcctcagggagccaatggtttgagtggaagt
gaaacgtcacttccggtggcggtaaatgaaatggcgaacgtcggagggggcggcggagga
gcgagcaagatggcggataaggagaagaaaaagaaagagagtattttagatctttccaaa
tacatcgacaaaacgatccgggtgaagtttcagggtgggagagaagcgagtggtgtcttg
aaaggatttgaccctctactgaaccttgtgcttgatggtaccattgaatatatgcgagac
ccagatgatcaatacaaattaacagaagacacacgtcagctgggacttgtggtctgccga
gggacttctgtggttctcatttgcccacaggatggaatggaagcgattcctaaccctttc
attcagcagcaagatggatag

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