Coturnix japonica (Japanese quail): 107325542
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Entry
107325542 CDS
T04297
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107325542 (HDGFL2)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107325542 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
107325542
NCBI-ProteinID:
XP_015742010
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All DBs
Position
28:1647484..1657258
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AA seq
643 aa
AA seq
DB search
MPHSFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YEKYKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPAPASSSDSDIPENDPMGGSDAGDDE
EDAAMAAVTTEKMESDEDSDRGSDHSGLKRKSLAMKYQMPVAKRPRKSSSEDQGSPSLTE
EENSETSSESEKNSDQDFTPEKKPVARAPRRMPAGGRKKKKVESGSDSDSKVDSDSEMGN
ATVDMTKSDSNSDSDSDVSVKKPQRGRKPAEKPPPKPRGRKPKLERVPISSSSDSDSDSD
VDRISEWKRRDEERRRELEEKRKREQEEEIRRLREQEKEEKEKRKEKAEKGEEVHSDSDS
SADDEVAKKGRKGRGKAPSSSDSELEMEKEVKKPVKKQPSELSRKPNQKEKRGRAEEKPR
NKPLKVERGRKKSDLIPERRMEKKKEPTVEEKLQKLHSEIKFALKVDNPDIKRCLNALEE
LGALQVTSHILQKHTDVVATLKKIRRYKANKDVMEKAAEVYTRLKSRVLGPKMEAIQKAN
KAGPEKDKGDVEKGQEKLSGGETQNEKGEEEVNADLSGPVNGESLSQKTEGTEEQERDKS
RGPGAGEMEAPSEEPHNNVQDYPSTERERARGESESVDDAEES
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacagcttcaagcccggagacctcgtcttcgctaagatgaagggttacccgcat
tggccagctaggatcgatgacatcgcggatggtgcagtgaaacccccgccgaacaagtac
cccatcttcttcttcggcactcacgagaccgcctttttgggtcccaaagacctgttccct
tatgaaaaatataaggacaaatatgggaaaccaaacaagagaaaaggcttcaacgaggga
ttatgggaaatccagaacaaccctcatgccagttacagtgcccctgcgcctgccagctcc
tctgacagtgacatccccgagaatgacccgatggggggaagtgatgctggtgatgatgaa
gaagatgctgccatggctgcagtcaccacagagaaaatggaaagtgatgaggactcagat
cgaggcagcgaccacagcgggctcaagcgaaaatcactggcaatgaaatatcagatgcca
gtggcaaaaaggcctcggaaatcttcaagtgaagatcaaggcagcccttctctgacagaa
gaggagaactcagaaacgtcttctgagtcagaaaaaaacagtgaccaggacttcactcct
gagaagaagccagtggccagagctccccgtaggatgcctgcagggggaaggaagaagaag
aaagtggagtctggctccgactctgactccaaggtggactcagactcagaaatgggaaac
gcgactgtggacatgaccaagtcagactccaactcggattcagactccgatgtgtctgtt
aaaaagcctcaacggggcagaaagccagctgagaaaccccctcccaagccccgtggtagg
aaaccgaaacttgagcgtgtccctatcagctccagcagtgatagtgatagtgacagtgat
gtggaccgtatcagtgaatggaagaggcgagatgaggaaaggcgacgggagctggaggag
aagaggaagagggaacaagaggaagaaatccggcggctccgggagcaggagaaggaggag
aaagagaaaaggaaggagaaagcagagaagggcgaggaggtgcattcagacagcgacagt
agtgctgatgatgaagtggccaaaaagggcagaaaaggccggggaaaggccccatcctct
tcagactctgagctggagatggagaaagaggtaaagaagcctgtgaagaagcagccctca
gagttgtcaaggaaaccaaatcagaaggagaagagaggccgagcagaggagaaaccacga
aacaaacctttgaaagtggaaagaggccggaagaagtctgacctgatccctgaaaggaga
atggagaagaaaaaggagcccacagttgaagagaaacttcagaaacttcacagtgagatc
aagtttgccttgaaggtggataacccggacatcaagcggtgcctgaatgcattagaggag
ctgggcgcactccaggttacctctcacatcctccagaaacacactgatgtggtggctact
ctgaagaagatccgtcgctataaagcaaacaaggacgtgatggagaaagctgctgaagtc
tacacccggttgaagtcgcgtgtcttaggaccaaagatggaagcaatccagaaagccaac
aaagctgggcctgagaaggacaagggggatgtggagaaaggccaggagaagctttcagga
ggggagacacagaatgagaagggagaagaggaagtgaatgctgacttgtcaggtcctgtg
aatggtgaatccttgtcccaaaaaacggagggcacagaagagcaggagagagacaaaagc
cgagggccaggagctggagagatggaggcacctagcgaggagccccataacaacgtgcag
gattatcccagcaccgaacgggagagggctcgtggggagtcagagtctgtggatgatgca
gaggagagctga
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