Coturnix japonica (Japanese quail): 107325591
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Entry
107325591 CDS
T04297
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03018
RNA degradation
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107325591 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
107325591 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107325591 (LSM4)
03041 Spliceosome [BR:
cjo03041
]
107325591 (LSM4)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107325591 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
107325591 (LSM4)
Spliceosome [BR:
cjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107325591 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107325591
NCBI-ProteinID:
XP_015742111
LinkDB
All DBs
Position
28:3007187..3012824
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctgtcgttgctgaagacggcgcagaaccaccctatgctggtggagctgaag
aacggcgagacgtacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgggaggtcatctgcacctcacgggatggtgacaagttctggaggatgccagagtgttac
atccgtggcagcacaattaaataccttcggatccccgatgagataattgacatggtgaaa
gaagaggtggtctccaaaggcagaggccgtggtgggatgcaacagcagaagcagcagaaa
ggccgcggtgttggaggtgctggacgaggtgtgtttggtggccgtggccgaggaatacca
ggcagtggaagaggccagcaggaaaaaaagccaggcaggcaatcggcaaagcagtga
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integrated database retrieval system
