Coturnix japonica (Japanese quail): 107325703
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Entry
107325703 CDS
T04297
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107325703 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107325703 (SMARCD1)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107325703 (SMARCD1)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107325703 (SMARCD1)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107325703 (SMARCD1)
PBAF complex
107325703 (SMARCD1)
GBAF(ncBAF) complex
107325703 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
107325703
NCBI-ProteinID:
XP_015742303
LinkDB
All DBs
Position
LGE22C19W28_E50C23:complement(343668..350789)
Genome browser
AA seq
524 aa
AA seq
DB search
MAARAGFQSVTPSGGGGGAATGTGALGPGTPGGPVRMGPAPGQGLYRSPLPGAAYPRPGM
LPGSRLAPQGPSMGPPGYGGSPAVRPGMAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDVSSALSKYDATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRL
ARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALD
NKQSRCCAYLLQIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVG
NPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggcttccagtcagtgactcccagcggtggaggcggcggggccgct
accgggaccggagcgctgggtccgggcacaccaggcggaccggtgcgcatgggcccagcc
ccgggacagggcttgtaccgctcacctctaccaggggccgcctacccgcgccctgggatg
ttaccgggcagccgtttggcaccgcaaggcccctctatggggccgcccgggtacggtggg
agcccggcagtgaggcccggtatggcgcaggccggcctggatcaggcccgtaagagacca
gcgccgcagcaactgcagcaggttcagcctcaggcggtgcccaaccgcaaccacaatgct
aaaaagaagaagatggcagacaaaattctacctcagaggatccgtgaacttgtgcctgag
tctcaagcttatatggacctgctggcctttgaaaggaaattggaccagacgatcatgagg
aaacgcttggatatccaggaggctttgaaacgacccattaagcaaaagcgaaagctacgt
atttttatctccaataccttcaatccagccaagtcggatgcagaggatggtgaaggaaca
gtggcctcctgggagcttcgagtagaaggaaggctgctagaagatgtgagttctgctttg
tccaaatacgatgccaccaaacagaaaagaaagttctcatccttctttaaatctctggtc
attgaacttgataaagacctctatggccctgacaatcacctggtagagtggcacagaact
gctacaactcaggagacagatggcttccaggtgaagaggccaggagatgtcaatgtgcgc
tgcactgtccttctgatgctcgattaccagcctccccagttcaaactggatccccgcttg
gctcgtctgctggggatccacactcagactcgcccagtgatcatccaggctttgtggcaa
tatatcaaaacccacaagctccaggacccccacgagcgggagtatgtcatttgtgacaaa
tacctccagcagatatttgaatctcagcggatgaagttctctgaaattccacaaaggctt
catgcactgcttatgcccccggaaccgatcatcattaatcacgtgatcagtgttgatcct
aatgaccagaagaaaacggcctgctatgacattgatgtggaggtggatgacaccttgaag
actcagatgaattcattcctgctatcaactgccagtcaacaggaaattgctgctctggat
aacaagcagtcccgatgctgtgcttatctcctccagatccatgaaacaatagagacaatt
aaccagctgaagacccagcgtgagttcatgctgagctttgcccgagatcctcagggcttc
atcaatgactggctccagtcccagtgccgggacttgaagacgatgactgatgttgttggg
aatcctgaagaggagcgtagagctgagttctacttccagccatgggctcaggaagctgtg
tgcagatacttctactccaaggtccagcaaagacggcaggagctggagcaggccctggga
atccgcaacacatag
DBGET
integrated database retrieval system
