Coturnix japonica (Japanese quail): 107325716
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Entry
107325716 CDS
T04297
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107325716 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjo04040
]
107325716 (SCN8A)
Ion channels [BR:
cjo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107325716 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
IQ
FraC
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
107325716
NCBI-ProteinID:
XP_015742344
LinkDB
All DBs
Position
LGE22
Genome browser
AA seq
1978 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNKGKTIFRFSATPALYILTPFNP
LRKIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILAR
GFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQA
TMEEAEQKEAEFQQMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
LSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRL
LPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFE
HVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLMELSLANVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWIKKKVREFMQAH
FKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPE
VEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIDIVNNKTDCEALMPP
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNLYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQF
IEYSKLSDFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLP
TKMENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERVKRQKEVRESKC
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccctgatagttttaaacctttcactccggag
tctctggctaacattgagaaacgcattgcagaagaaaagaagaagaagcgtccaaagcaa
gacagcagccatcgcgacgacgatgaagacagcaaaccaaaaccaaacagtgaccttgag
gcggggaagaatttgcctttcatctatggggacatccctaaaggcctggttgctgtacca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactgaacaaaggg
aagacaatcttccgatttagtgccacacctgccttgtacattttaactcctttcaatcct
cttagaaaaatagctattaagattttggtacattcattattcagcatgcttattatgtgc
actattttgaccaactgtgtatttatgaccatgagtaaccctcctgactggacgaagaat
gtagagtacactttcactggaatttatacttttgaatcactgataaaaattcttgcaagg
ggcttctgcttagaagattttacttttctgcgagatccatggaactggctggatttcagt
gtgatcgttatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgaga
acattcagagttctccgagctttgaaaacaatatcagtcattccaggcctgaagaccatt
gtgggtgccctgatccagtcggtgaagaagctgtcggatgtgatgatcctgacggtgttt
tgtctcagtgtttttgctctgattgggctgcagctatttatgggcaatttgaggaacaag
tgtgtaatatggccaattaacgtgaacgagaccttcctggataatggctcccggggcttt
gactgggaggaatacaccaacaatatgtcaaatttttacataattcctggtgcccctgat
cctttgctctgtggtaacagctccgatgcaggtcaatgtccagagggttacacgtgcatg
aaagcgggacggaacccaaactacggttacacgagctttgacactttcagctgggctttc
ctgtctctgtttcgccttatgactcaggacttttgggagaacctgtatcaattaacctta
agagcggcaggaaaaacctacatgatcttctttgtcctggtcatcttcttgggctcgttc
tacctggtcaatttgattctggctgtggttgccatggcatatgaagagcagaaccaagca
accatggaagaagcagagcagaaagaggcagaatttcagcaaatgctggaacagctgaaa
aagcagcaggaagaagctcaggctgctgccatggtcacttcagcagggacggtctctgaa
gatgctgtggaagatgatggcggtgggaggatgtctcggagctcatcagagatctctaaa
ctgagttctaagagtgccaaggagcgccgtaaccggaggaagaagcggaaggacaaagag
ctgtcggaaggagaggagaagggtgacaacgagaaagtgtttaagtcagaatcagaggat
ggcatgaggagaaaagccttcaggctgccagataacaggataggaaggaagttttccatc
atgaaccagtctctcctcagcatcccgggctcccctttcctctcccgacacaacagcaag
agcagcatcttcagctacaagggtcgattccgcgacccaggctcagagaatgaatttgct
gatgatgagcacagcacggtggaggagagcgaaggccgcagggattccctcttcatcccc
atccgcggccgcgaccgacggagcagctacagcggatacagcggctacagccagggcagc
cgttcctcaaggatcttccccaacctccgccgtaacatcaagaggaacagcacggtggat
tgcaatggcgtcgtgtccctcattggcggcccaccttccagcatgcccggcgggcgcctt
ctgcctgagggtacgactgaaattgaaattaagaagaaacctggtgggtctctcttggtc
tcaatggatcaggtgaatgcctcctatggaaggaaagatcgtaccaacagcgtgatgacc
ggcttgaccaacaccctggttgaggagctggaggagtcccagaggaaatgtcccccatgc
tggtacaaatttgccaacacattcttgatctgggaatgccacccctactggatcaagctg
aaggagatagtgaacttaatcgtcatggatccttttgttgacctggccatcaccatctgc
attgtgctcaacactctgttcatggcaatggagcatcatcctatgacccccgagtttgaa
cacgtgctctccgtaggaaatctggttttcactgggattttcacagcagaaatgttcctg
aagataattgccatggatccttattattatttccaagaaggctggaatatctttgatgga
ttcattgttacccttagtttaatggagctgagtctggccaacgtggaggggctttctgtg
ctgcgatctttccgattgctgagagtcttcaaactggccaagtcctggcccactctgaac
atgctgataaaaatcatcggtaactcagtgggtgctttgggcaacttgaccttggtgttg
gccatcatcgtcttcatctttgcggtggttggcatgcagctctttgggaaaagctacaag
gaatgtgtctgcaagatctccagtgactgtgaacttccacgctggcacatgcatgatttt
ttccactctttcttgattgtattccgagtgctgtgtggagaatggatagaaaccatgtgg
gattgtatggaggtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtc
atcggaaatttagtggtgctgaacctgttcctggctttgctgctgagctccttcagtgca
gacaacctggcagcaacagatgacgatggggagatgaacaacctgcagatctcagtgatt
cgcatcaagaagggcattgcctggattaagaagaaagtgcgtgaattcatgcaggctcac
ttcaagcagagagaagcagatgaggtcaaacccttggacgagctgtacgacaagaaggtg
aactgcattgccaaccacacaggggctgatatccacagagacattgattatcagaagaac
ggcaatggcacgaccagtgggattgggagcagcgtggagaaatacatcatcgatgaagac
cacatgtccttcatcaacaaccccaacctgaccgtccgggtgccaattgctgtcggggaa
tcagactttgaaaatctcaatacagaagatttcagcagtgatacagaccctgatggcagc
aaagagaaactggatgataccagctcctccgaaggcagcaccattgatatcaagcctgaa
gtggaagaggtcccagtggaggcaccagaagagtatctggacccggatgcgtgcttcaca
gagggttgcatgcaacgctgtaagtgttgtcaggtcaatattgaggaggggctggggaag
tcttggtggaccttgaggaagacgtgttttctgatcgtggagcataactggtttgagacc
ttcatcatcttcatgatcctgctgagcagtggagctctggcctttgaggatatttacata
gaacagaggaaaaccatccggaccatcctggagtacgcagacaaggtcttcacctacatt
ttcatcctggagatgttgctgaaatggtgtgcctatggattcgtcaagttcttcaccaac
gcctggtgctggctggatttcctcattgtggctgtctctttagtcagccttatagctaat
gccctgggctactcggaactaggtgccattaagtcccttaggacactaagagctttgaga
cctctaagagccttgtcacgatttgaagggatgagggtggttgtcaatgccttggttggc
gctatcccatccattatgaatgtcttgttggtctgtcttatattctggctaattttcagc
atcatgggagtaaatctgtttgctgggaaataccattactgctttaatgaaacgtctgag
gagcgctttgaaatagacattgtcaacaacaagacggactgcgaagcactgatgccgccc
aactccactgagatccgatggaagaatgtgaaaatcaactttgacaacgttggggcagga
tacctggctcttcttcaggtggcaacattcaagggctggatggacatcatgtatgcagca
gtagattccagaaagcaagaagagcaacccaagtatgaggacaacctgtacatgtatctt
tattttgttatctttatcatctttgggtcctttttcaccctgaacctgttcattggtgtc
atcattgacaacttcaatcaacaaaaaaagaagtttggaggtcaagatatatttatgaca
gaagaacagaagaaatactacaatgcaatgaaaaaactgggatccaagaaacctcaaaag
ccaattccccgacctttgaaccgcattcagggagctgtctttgactttgtcacccaacaa
gcatttgacattgtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggag
acggacacgcagagcaagcagatggaggatatcctctactggatcaactttgtgttcgtc
atcttcttcacctgcgagtgcgtgctgaagatgtttgccttgcggcactactacttcacc
attgggtggaacatctttgactttgtggttgtgattctgtccattgtgggaatgttctta
gctgagatgattgagaagtattttgtgtcccctactttgttccgagtcatccgacttgcc
agaataggtcgcatcctgcgtctcattaaaggtgccaaagggatccgcactcttcttttt
gccttaatgatgtctcttcctgctttgttcaacattggcctgctgctcttcttggtcatg
tttatctatgcgatatttggcatgtccaactttgcctacgttaagagggaagttgggatt
gatgacatgttcaactttgaaacatttggcaacagcatgatctgcctatttcaaattacc
acatctgctggctgggatggcctcttgctgcccatccttaaccggcctccagactgcgac
ctggataaggagcaccctgggagcggctttaaaggtgactgtggcaacccttcggttggg
attttcttctttgtcagctacatcatcatatcctttctggtggtggtgaacatgtacatt
gctgtcatcctggagaacttcagtgttgcaactgaagaaagtgctgagcccttgagtgag
gatgactttgagatgttctatgaagtctgggagaagtttgatccagatgcaacacaattc
atagaatacagcaaactatcagattttgctgatgctttggaacatcctctacgcgtccca
aagcccaacaccatcgaactcattgccatggacctccctatggtaagtggagataggatc
cactgtttagacatcctgtttgccttcaccaaacgcgtcctgggggacagcggagagctg
gatatactgagacaacagatggaggaaaggtttgtggcttccaacccttccaaagtgtct
tacgagcccatcaccaccacgctgcggcgcaagcaggaggaggtctcagctgtggtgttg
cagagggcttacaggtcacggttggcgaggcgggggttcatcagccgaagacccctcccc
accaaaatggagaatggaggagcaaacagggagaagaaggaagggacgccctccaccgca
tcgctgccgtcctacgacagcgtcaccaaacccgagaaggagaagcagcagcgggcggag
gagggaagaagggaaagggtgaaaaggcaaaaagaggtcagggaatccaagtgttga
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