KEGG   Coturnix japonica (Japanese quail): 107325933
Entry
107325933         CDS       T04297                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    107325933 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cjo04131]
    107325933 (WDR7)
Membrane trafficking [BR:cjo04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    107325933 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd WDR55 CFAP251_N Beta-prop_EML ASA1 EIF3I ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR41 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_WDR19_1st PAC11 WDR72_alpha-sol WDR90_beta-prop_4th Tricorn_2nd PD40 LRS4
Other DBs
NCBI-GeneID: 107325933
NCBI-ProteinID: XP_015742713
UniProt: A0A8C2SYQ4
LinkDB
Position
Z:complement(417990..524852)
AA seq 1487 aa
MAGNSLVLPIVLWGQRAPTHCISTLLLMDDASMIITGCHDGQICLWDVAPDLEINPRALL
FGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFM
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLLSKISPDWISSMTIIKSNRTQEDTVVAV
SVTGILKVWIITSEVNRMQDTTPVFEEESKPIYCQNCQSISFCAFTQQSLLVVCSKYWRV
FDAGDYSLLCSVPSENEQTWTGGDFVSADKVIVWTEDGQSFIYKLPASCLPASDLFRRDV
GKAVENLIPPLLYSVLDRADKQLLICPPVTRFFYGHREFFSNLLIQGDSSGRLCIWSIPD
TLEQEDGAKGLQTTTSISLQEAFDKLTPRPAGIIDQLSLIPNIKEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKITCLLYPHQVSSRY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEALPAAVDSLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNSALISPENL
QKASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEDEDEESMRQRREDTDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPGYNQPVGKQSYDGVELGRKMSITEGLGKGTYGVSRAVTTQHLLSVISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPEMSKMKAPPSMASHAAQGQIKQVAPAVSSSTEA
GHSGSDTAPPLHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKETIDAWAPYLPQYIDSVISPGVTTEAIQTATASPDSLGT
EAKVQEEEHDLVDDDITAGCLSGLPQLKKISTSYEERRKQATAIVLLGVIGAEFGAEIEP
PKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPAHSTIRRTAID
LIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIA
TARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVD
LLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIR
TGKCQTIHGHKGPITAVAFAPDGRYLATYSNSDSHLSFWQMNTSLLGSIGMLNSAPQLRC
IKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFVV
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggctgggaacagccttgtgttgcccattgtcctatggggccagagggctcccacccac
tgcatatcaacactgctgctcatggatgatgcctcgatgatcatcactggctgccacgat
ggccagatatgtctctgggacgttgctccagatttagagattaaccccagagctctgctg
tttggtcacacagcctcaatcacttgtttatcaaaagcctccgcatccagtgagaagcag
tacatagtgagtgcgtcagagagtggggagatgtgtctgtgggatgtgaatgatggcaga
tgcatagagtttacgaagctagcctgcacacacactggcatacagttctaccagtttatg
gttgggactcagcgtgaagggagactgttatgccatggacattacccagaaattcttgtt
gtggatgctaccagccttgaagttctttattctttactatcaaagatatctcctgattgg
atcagctccatgactatcattaaatccaacagaacacaagaggatactgttgtagcagtt
tcagtgactggcatcctgaaagtatggataataacatctgaagttaatcgcatgcaggat
acaacaccagtatttgaagaggaatcaaaacctatttattgtcaaaactgtcaaagcatt
tctttctgtgcgtttacccagcagtcgttgttggtagtgtgctctaaatactggagggtt
tttgatgctggagattattcccttttatgctcagtccctagtgagaatgaacagacctgg
actggtggtgactttgtgtcagctgacaaagtgattgtgtggacagaagatggtcaaagt
ttcatatataaattaccagccagctgtcttccagccagtgacttgtttcgtagagatgtg
gggaaagcagtagaaaacttaattcctcccttattgtacagtgtattggacagagcagat
aaacagttactgatatgccccccagtcacccgattcttctatggacatagggaatttttc
tctaatctgctgatccaaggagactcttcagggaggctgtgcatttggagcatacctgat
actctggaacaagaagatggtgcaaaaggactgcaaacaacaacttcaatatccctccag
gaagcttttgataaacttactcctcgcccagctggaattatagaccaactaagcttaatt
ccaaacatcaaggaaccacttaaggttacagccagtgtgtacattccagcccatgggcgg
ctggtttgtggtcgggaagatggaagcattgttatcgtgccagcaacccagactgctata
gttcagcttttgcaaggagagcatatgcttaggagaggttggccacctcaccggactctc
agaggtcatcgaaacaaaattacttgcttactgtatcctcatcaggtttcttctcgttat
gatcaaaggtatttgatctcaggtggtgtggatttctcagtcatcatatgggatatattt
tctggagagatgaaacatatcttctgtgtacatggtggagaaattacacagcttctagtt
ccaccagaaaactgtagtgcaagagtccaacactgtatttgctccgtggccagtgatcac
tctgtaggtctccttagtctgcgtgagaagaaatgcatcatgctggcatcccgccacctc
ttccctattcaagtgatcaagtggaggccttctgatgactacctggtagtgggatgctct
gatgggtccgtgtatgtctggcaaatggacactggtgctctggacagatgtgtgatggga
ataacagcagttgaaatcctgaatgcttgtgatgaggcattgcctgcagctgtggactcc
ctaagccaccctgccgtcaacctgaagcaggccatgacacgacgcagcctggctgccctg
aagaatgtggcacaccagaagctgcagaccttggccaccaacctgctggcttctgaggct
tctgacaaggggaatttacctaaatattcacataactctctgatggttcaagctataaag
actaacttgacagatccagatatacatgtgctcttctttgatgtggaagcactgataatt
cagctgctgaccgaagaggcctcaagacccaacagtgccctcatatctccagagaattta
cagaaggcctctggtgggtctgacaagggaggctccttcctgactggtaagcgagcagct
gtcctcttccagcaggttaaggaaaccatcaaagaaaacataaaagaacatcttcttgat
gatgaagatgaggatgaagaatcaatgagacagaggagagaagacactgacccagaatat
cgttctagcaaatccaaaccattaactctactagaatacaacctaaccatggatacagca
aagctttttatgtcctgtcttcatgcctggggcttgaattctgttctagatgagctttgc
cttgatcgtcttgggatgcttaagccacactgctcagtgtcctttggccttctgtctaga
ggaggccacatgtctctgatgcttcctggctacaatcaacctgtaggcaaacaatcttat
gatggcgtggagttgggcaggaagatgtctattacagaaggattgggaaagggaacatat
ggtgtgtcgcgtgctgtcaccacccagcatctcctctctgtcatatcactggcaaacaca
ctgatgagcatgaccaatgcaacctttattggagaccacatgaagaaaggccccaccagg
ccacccagaccaggcactcctgaaatgtcaaaaatgaaggcacctccgtctatggcaagt
catgcagcccagggacaaattaagcaagttgctcctgctgtttcttctagcactgaagct
ggtcactctggctctgacactgctcctcctttacatacctgtttcttagtaaatgaaggg
tggagccagcttgctgccatgcactgcgtgatgcttcctgacctgctgggtctggacaaa
tttaggcctcctcttctggagatgttggctcgtagatggcaggaccgctgcctggaggta
agagaagctgcccaggccctgctgctagcggaactgaggaggattgagcaggcaggccgg
aaggagaccattgatgcttgggctccatatttgccacagtacattgacagtgtcatatca
cctggagtaaccacggaagccattcaaactgctaccgcaagcccagattcactgggaaca
gaggcaaaagttcaggaggaagagcatgatctagtggatgacgacatcacggcaggctgc
ctctctggtctgccgcagctgaagaagatctccacgtcctatgaggagcgcaggaaacag
gctacagccattgttctgctgggtgtgattggggcagaatttggggctgagattgagccc
cctaagctgctgacacggccacggagctccagccagatccccgagggctttgggctgacg
agcggtgggtccaattattccctggcaaggcatacctgcaaggcattgacgtttctgctg
ctgcagccacccagccccaagctgcctgcgcacagcaccatccgcagaactgccatcgac
ctcatcggccgtggcttcactgtctgggagccctacatggatgtctctgctgtgctgatg
ggtctgctggagctctgcgctgatgctgagaagcagctggccaacatcacaatggggctg
cccctgagcccggcggctgactctgcacgctcggcacgacacgcgctctcgctcatcgct
acagcccggccgcccgccttcattaccaccatcgccaaggaggtgcacagacacaccgcc
cttgcagcgaacacgcagtctcagcagaatattcacaccacaactcttgctcgagctaaa
ggagagatcttgagagtcattgaaatacttattgagaagatgcctaccgacgtcgtggac
cttcttgtggaggttatggacatcatcatgtactgcctcgaaggatctttagttaagaaa
aaaggtcttcaagaatgctttccagccatctgcaggttctacatggtcagctattacgag
cgaagtcacagaatagcagttggagctcgccatggttcagtggccctctacgacatccgg
actgggaaatgtcagacaatccatgggcacaaggggccgatcacagcagtggcctttgct
cctgacggccggtacctcgccacctactccaactcagacagccacctctccttctggcag
atgaacacgtcactgctgggcagtatcggcatgctcaactcagctccccagctgcgctgc
atcaagacctaccaggtgccacccgtccagcccgcttcccccggctcacacaacgccctg
cgcctggcccgcctcatctggacctccaaccgcaacgtcatcctcatggcccatgatggc
aaggagcaccgcttcgtggtctag

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