Campylobacter jejuni subsp. jejuni PT14: A911_04830
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Entry
A911_04830 CDS
T02264
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cjp
Campylobacter jejuni subsp. jejuni PT14
Pathway
cjp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cjp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A911_04830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjp03021
]
A911_04830
Transcription machinery [BR:
cjp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A911_04830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
Sigma70_r4_2
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
AFU43055
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Position
931744..933612
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AA seq
622 aa
AA seq
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MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTTKKVQALMKKHKVQLFSAAEI
AQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPVRMYLREMGQIALLN
KDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDDEEKSD
DKLDELDIDEDEENETELESDEENTKKNSKKEDERTLKVIEKFKALEKAKKDWLKTSKDK
ESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRLEYR
LPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTYMEIKKLFQTKEASEKSFDLE
KSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMK
AVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINQINKIIREHLQKD
GKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPIGNEDDGKFGDFVEDRNSLSPMDH
ILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQIESS
AIKKLKHPKVGRKLKNYIEGWK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaaaactcaagaagctgaattagaagaattatttcaagaaaatgcaaaagat
tatatcacatatgaaaaattggtaaaatatcttacaaaacaaccaagtgcatcaaccact
aaaaaagtgcaagcattaatgaaaaaacacaaagtgcaacttttttcagcagctgaaatt
gcacaaatgaaaaacatagaagatgcaaaaagacttcaagaagaaaaacaaaaactccaa
gatacaagccttgagaacgaatttgatttagccaatgaaaacgatttattagaatggagc
agatcagactctcctgttcgtatgtatttaagagaaatgggacaaattgctttattaaac
aaagatgaagaaattgaaatttccaaaaaaatagaacttggcgaagatattatcattgat
gctttttgttctgtaccttatttgatagattttattttagattataaagaacctttaata
aacagagaaagaagggtaaaagaactatttaaaagctttgacgatgaagaaaaaagtgat
gataaacttgatgaacttgatatagatgaagatgaagaaaacgaaacagaattagaatca
gatgaagaaaatactaaaaaaaacagcaaaaaagaagatgaaagaactttaaaagttata
gaaaaatttaaagctctagaaaaagctaaaaaagattggctaaaaacatccaaagacaaa
gaaagcggagatgaacttttagataaattaagcattgcgttcaaaaaaaatattttaaaa
gaaaaattaatggatctaggccctacttcaaaacttattagcgaaatcgtaaaatcaatg
gaaactgcactaaaaagtgatgaagaatttgacaaagaacttaagcgtttagaataccgc
ttacctatgttttctgatgaacttaaaaaacgccatgcagatattttaaaagatattaca
aaattgagcaaagaagaaatcacagagcgagctttagaaacaaccatggtaagcacttat
atggaaattaaaaaactatttcaaactaaagaagccagtgaaaaaagctttgatcttgaa
aaatcacgcttaaaagaaattttggagcaaattaaacgcggtaaaaaaatctctgatgaa
gcaaaaggaagaatggcaaaatcaaacttgcgccttgttgtaagcatagctaaacgctac
acaaatcgtggtctgcctttcttagaccttatccaagaaggaaatataggtttgatgaaa
gctgtggataaatttgaatacaaaaggggttataaattttccacttatgcaacttggtgg
atcaggcaagctatttcaagggctatagctgatcaagcaagaaccataagaattccaatc
catatgatagaaaccatcaatcaaattaacaaaattatccgcgaacatctacaaaaagat
ggaaaagaacctgatgtcagtgttatagctaaagaagtaggtttaagcgtagataaggtt
aaacaagttattaaaatcacaaaagaaccaatttctcttgaagctccaataggaaatgaa
gatgatggtaaatttggagattttgttgaagatagaaattcactttctccaatggatcat
atcttaaaggatgatttaaaagaacaaattgatgaagttttagatcaattaaacgataga
gaaaaagcggtaattcgtatgcgttttggtttaatggatgatgaaagtgatagaacttta
gaggaaattggaaaggaacttaatgtcactcgagaaagagtgagacaaatagaaagctca
gctataaaaaaactcaaacaccctaaagtaggaagaaaactaaaaaattatatagaaggt
tggaagtaa
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