Campylobacter jejuni subsp. jejuni 35925B2: UC78_0003
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Entry
UC78_0003 CDS
T03745
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cjq
Campylobacter jejuni subsp. jejuni 35925B2
Brite
KEGG Orthology (KO) [BR:
cjq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjq03032
]
UC78_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
cjq03400
]
UC78_0003 (gyrB)
Enzymes [BR:
cjq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UC78_0003 (gyrB)
DNA replication proteins [BR:
cjq03032
]
Prokaryotic type
DNA Topoisomerases
UC78_0003 (gyrB)
DNA repair and recombination proteins [BR:
cjq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UC78_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJP34520
LinkDB
All DBs
Position
2579..4888
Genome browser
AA seq
769 aa
AA seq
DB search
MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDV
EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDTYKVSGGLHGVGVS
VVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSKKTGTTIEFWPDDQIFEVTEF
DYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEGGISQFVTDLNKKEALTKAIFFS
VDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTRVISNYIEANASAR
EKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSTYVRPIVSKASFEYLTKYFEEN
PIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQSKDPSESEIYLVE
GDSAGGSAKQGRERSFQAILPLRGKILNVEKARLDKILKSEQIQNMITAFGCGIGEDFDL
SKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIY
LKDEKALSEYLIETGIEGLNYEGIGMNDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMI
ENSNLVKANNEELFSVIKQFLETQGHNILNHYINENEIRAFVQTQNGLEELVINEELFTH
PLYEEASYIFDKIKDRGLEFDKDILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTM
DPSVRRLLKITIEDAQSANDTFNLFMGDEVEPRRDYIQAHAKDVKHLDV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaattatggtgcgagtaatattaaagtcttaaaaggcttagaagctgttaga
aaacgcccaggtatgtatataggagatacaaacataggcggacttcatcatatgatttat
gaagttgtggataattctattgatgaagctatggcaggacattgtgatactatagatgta
gaaatcactactgaaggaagctgtatagttagtgataatggtcgtggtattcctgttgat
atgcacccaactgaaaatatgccaactttaactgttgttttaactgtcctacatgcaggg
ggaaaattcgataaagatacttataaagtttcaggcggtttgcacggtgttggggtttcg
gttgtaaatgcactttctaaaaaacttgtagctacagttgaaagaaatggagaaatttat
cgtcaagaattttcagaaggtaaagttatcagtgaatttggtgtgataggaaaaagtaaa
aaaacaggaacaactatagaattttggcctgatgatcaaatttttgaagtgactgaattt
gattatgaaattttggctaaaagatttcgtgaacttgcatacttaaatccaaaaatcact
ataaattttaaagataaccgcgtaggcaaacatgaaagttttcactttgaaggtggaatt
tctcagtttgttacagacttaaataaaaaagaagctttaactaaagcaattttctttagc
gtagatgaagaagatgtgaatgttgaagtagctttgctttacaatgatacttatagtgaa
aatttactctcttttgtaaataatatcaaaactccagatggtggaacacacgaagctggt
tttagaatgggtttaactcgtgtgataagtaactatatagaagcaaatgcaagtgctaga
gaaaaggataataaaatcacgggtgatgatgtgcgtgaaggtttgatcgctattgtgagt
gtaaaggtacctgaaccacaatttgaaggacaaaccaaaggaaaacttggttcaacttat
gtgcgtcctatagtttcaaaagctagttttgaatatttgactaaatattttgaagaaaat
cctattgaagctaaagctataatgaacaaagccttaatggcagctagaggaagagaagca
gcgaaaaaagctagagaattaacgcgtaaaaaagaaagtttaagcgtaggaactttacca
gggaaattagctgattgtcaaagtaaagatccaagtgaaagtgaaatttatcttgtggaa
ggggattctgcaggaggttctgcaaaacaaggtagggaaagatctttccaagctatactg
cctttgcgtggtaaaattttaaatgttgaaaaagcaagactagataaaattttaaaatct
gagcaaattcaaaatatgattaccgcttttggctgtggtataggtgaagattttgatctt
tcaaaacttagatatcataaaatcatcatcatgacagatgcggatgttgatggatctcat
atacaaaccttgcttttaactttcttcttccgttttatgaatgaacttgtagcaaatgga
catatttatttagcacaaccacctttatatctttataaaaaagctaaaaagcaaatttat
ttaaaagatgaaaaagctttgagcgaatacctgatagaaacaggaatagaaggtttaaac
tatgaaggtataggaatgaatgatttaaaagattatttaaaaatcgtcgcagcttatcgt
gcgattttaaaagatcttgaaaagcgttttaatgtgatttctgtgatacgctatatgata
gaaaattcaaatttagttaaagcaaataatgaagaattatttagtgtaatcaaacaattt
ttagaaacacaaggacacaatatcttaaatcattatatcaatgaaaatgaaattcgagct
ttcgttcaaactcaaaatggcttagaagaacttgtgatcaatgaagaacttttcactcat
ccactatatgaagaagcaagttatatttttgataagattaaagatagaggcttggaattt
gataaagatattttagaagttcttgaagatgttgaaaccaatgctaaaaaaggtgctact
atacaacgctataaaggtttaggggaaatgaatcctgagcaactttgggaaaccacaatg
gatccaagcgtaagaagacttttaaaaatcactattgaagatgcacaaagtgcaaatgat
acctttaatctctttatgggtgatgaggttgaaccaagacgcgattatatccaagcacac
gctaaagatgtaaagcatttggatgtgtaa
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