Campylobacter jejuni subsp. jejuni 35925B2: UC78_1620
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Entry
UC78_1620 CDS
T03745
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cjq
Campylobacter jejuni subsp. jejuni 35925B2
Brite
KEGG Orthology (KO) [BR:
cjq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjq03032
]
UC78_1620 (topA)
03400 DNA repair and recombination proteins [BR:
cjq03400
]
UC78_1620 (topA)
Enzymes [BR:
cjq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UC78_1620 (topA)
DNA replication proteins [BR:
cjq03032
]
Prokaryotic type
DNA Topoisomerases
UC78_1620 (topA)
DNA repair and recombination proteins [BR:
cjq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UC78_1620 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_2
DUF1272
Motif
Other DBs
NCBI-ProteinID:
AJP36090
LinkDB
All DBs
Position
complement(1578600..1580702)
Genome browser
AA seq
700 aa
AA seq
DB search
MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGIKIEDDEFIPEYRITSD
HSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKDENTLPRIVFHEITKNAIE
NALKNPRKLDMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQRGLSAGRVQSAALKIIVDRE
KEIRAFVPLEYFSIDLIFQKDLDAELVEFDKAKIEKLTITNKDRAKLILEACKNEAYNIN
DIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVNTHEGVMGVITYMR
TDSLNLAKEAIENARKFIQTNFGKDYLPSKANVYTTKAKGAQEAHEAIRPTNLSFTPEIA
AKFLDKDELKLYTLIYNRFLACQMNPAISQTQNVFVKNDRAVFKISGRKILFDGYYKVYG
DMDKDKILPNFKIGENLKIQNLEMNSHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTIS
ILTSRDYVKIDKKQLIPSEIAFNVTEVLEKNFSDIVDSKFTSNLENTLDEIAEDKADWQE
TLKEFYYPFMRKIEEGKTKIASQKTVTKLGESCPDCGGELAIRKGRFGEFVACLNFPKCK
YSRNLKSESKNESENTAAKAKANGTGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFIS
KYKPSEEKCEECGETLVIKELKKGTFLECLKCKIKKEMKD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatttaatcatagtagaatctcctgcaaaagctaaaactataggaaatttt
ttgggaaaagattatgaagttatcgcttctaaaggacatattagagatttgcctaaatca
agctttgggattaaaatagaagatgatgaatttatccctgagtatagaatcacaagtgat
catagcgccttagttaaagaacttaaaagcaaagccaaagatgccaaagaagtctatctt
gcaacggatgaggatagagaaggagaggctatagcctaccatattgcaaaagctatagga
aaagatgaaaacaccttaccacgtattgtttttcatgaaatcactaaaaacgctatagaa
aatgctttaaaaaatccaagaaaattagatatgcactctgtaaatgctcagcaaactaga
cgccttttagatcgcattgtaggatataaactcagccccttattaggacaaaaaattcaa
agagggcttagcgcagggcgtgttcaaagtgcagctttaaagatcatagtcgatcgtgaa
aaagaaattcgtgcttttgtgccactagaatactttagtattgatctgatttttcaaaaa
gatttagatgcagaactggttgagtttgacaaagctaagatagaaaaacttaccattacc
aacaaagatcgtgctaagcttatactagaggcttgtaaaaatgaagcttataatataaat
gatattgaaagcaaagaaagaaaaatcgctccaccacctccttttatgacttcaaccttg
caacaaagtgctagcaatcgccttggttttaaccctaaaaaaaccatgatgatagctcaa
aaactctacgaaggagtaaatactcacgagggcgtgatgggggttattacctacatgaga
accgatagtttaaatttagccaaagaagctatagaaaatgcaagaaaattcatacaaaca
aattttggcaaagactatcttccaagcaaagcaaatgtatacactacaaaagccaaaggc
gctcaagaagcccatgaagctatacgccctacaaatttaagttttactccagaaattgcg
gccaaatttttagacaaagatgagttaaaactttacacacttatttacaatcgcttttta
gcctgtcagatgaatcctgctatctctcaaactcaaaatgtatttgtaaaaaatgataga
gcagtttttaaaataagcggtagaaaaatcctttttgatggatattataaagtttatggt
gatatggataaggataaaattttaccaaattttaaaataggtgaaaatttaaaaatacaa
aatttagaaatgaactcacattttaccgaaccaccttcaaggtattcagaagcaggactt
gtaaaaaaacttgaaagtttaggcataggtcgcccttctacttatgcgccaactatttct
atacttacaagtcgtgattatgtaaaaatagacaaaaaacaactcattcctagtgaaatt
gcttttaatgtaaccgaagtgcttgagaaaaattttagcgatatagtagatagtaaattt
acttcaaaccttgaaaacaccttagatgaaatcgctgaagataaggcagactggcaagaa
actttaaaagaattttactatccttttatgagaaaaatcgaagaaggaaaaacaaaaatt
gctagtcaaaaaactgtcacaaaactaggtgaaagttgtcctgattgtggcggggaactt
gctattagaaaagggcgttttggagaatttgtagcgtgtttaaatttcccaaaatgcaag
tattcaagaaatttaaaaagtgaaagtaaaaatgaaagcgaaaatactgccgcaaaagct
aaagctaatggtacaggtattacttgtccaagttgtcaaaaaggtgaaatcgtagaacgc
ttttcaaaacgcggtaaattttatggctgtagtgcttatccaaaatgcaattttataagc
aaatacaaaccaagtgaagaaaaatgcgaagagtgtggcgaaactttagtgataaaagag
cttaaaaaaggtacattcttagaatgcttaaagtgcaaaatcaaaaaagaaatgaaggat
tag
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