Campylobacter jejuni subsp. jejuni 35925B2: UC78_1646
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Entry
UC78_1646 CDS
T03745
Name
(GenBank) Ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cjq
Campylobacter jejuni subsp. jejuni 35925B2
Pathway
cjq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UC78_1646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjq03019
]
UC78_1646
Messenger RNA biogenesis [BR:
cjq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UC78_1646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AJP36116
LinkDB
All DBs
Position
complement(1596433..1598421)
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AA seq
662 aa
AA seq
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MDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNENDTPKIDQNSNKENSENSEN
KTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRVSHENRLHPLKYNNSSEHKIRITPLG
GLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHA
HEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAERKWFRPVEKRKVYEIGEFD
IEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDLGRLAHYGEEGVLCLL
SDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSSNIHRVYQAITYGLKYGRKVC
VIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTTGSQGETMSALYRMAT
DEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKAGAKVAYQEFSEIHVSGHASIEE
QKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPERNIYLMSDGDQVELCQKYVKRVK
TVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQIDKTTKTLINKPRVFSYGLVA
DKHDHAFSKDMAEVLGQFFINVKDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIF
VM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaacaaagagataaataaaaacgaacaaaatccgaactcaaattcaaaaaac
aataaacgctataaatataaaaatcgcagaaaaaaattagctgattctttgcaaaatgaa
aatgatactccaaaaatcgatcaaaattctaacaaggaaaattctgaaaactcagaaaat
aaaactgagaaaaaaaagaagaaaaatcgtaatcttccttcaaaactcacaggcaatgaa
gattggcaaatcgctcttgcagaatgtatagaagctaaccgtgtttcacatgaaaaccgc
ttgcaccctttaaaatataataattctagcgaacataaaatccgcatcactcctttaggg
ggcttaggagaaattggtggaaatatcagtgtttttgaaaccaataaagacgcaattata
gtagatataggtatgagttttcctgatggaactatgcatggggtagatattatcatccct
gattttgactatgtaagaaaaattaaagataaaattcgtggtatagtgatcactcatgca
cacgaagatcatatcggtgcggtgccttatttctttaaagaatttcaatttcctatctac
gctacacctttggctttagggatgatttcaaacaaatttgaagaacatggcttaaaagca
gaacgcaaatggtttcgccctgtagaaaaacgcaaagtttatgaaataggtgaatttgat
atagagtggatccacatcacgcattctatcattgatgcttcagcacttgcgatcaaaaca
aaagcaggaacgattatccacacaggtgattttaaaatcgatcaaactccaattgatggc
tatccaacagatttaggacgtttagcacattatggagaagaaggagttttatgtctttta
agtgatagtacaaattcttataaagaaggttatacaaaaagtgaaagctctgtagggcca
acttttgatcaaatttttgcacgtactaagggtagggtgatcatgagtacttttagttct
aatatccaccgtgtttatcaggctatcacttatggtttaaaatacggcagaaaagtttgt
gttattggtcgttctatggaaagaaatctttatactactatggaattaggctatattaaa
cttgatagaaaaattttcatcgatgccgatgaggtaagcaaatataaagacaatgaagtg
cttattgtaactacaggaagtcaaggcgaaaccatgagtgcgctttatagaatggcaact
gatgagcataaatttataaagattaagcctacagatcaagtgatcatttcagctaaagcc
ataccaggaaatgaagcaagcgtttctgcggtgcttgactatcttttaaaagcaggagct
aaagtagcgtatcaagaatttagtgaaattcatgtaagcggacacgctagtatagaagag
caaaaacttatgctaacccttactaaacctaaatttttcttaccagttcatggagaatac
aatcacatcactaaacacaaagaaacagcgatgaaatgtggtattcctgaaagaaatatc
tatcttatgagcgatggcgatcaagtagaactttgccaaaaatatgtcaaacgcgtaaaa
accgtaaaaacaggtaaagtttttgtagataatcaaatcaacaaacaaatcgccgatgat
gtagttatagatcgccaaaaacttgcagatagtggtatagtggttattatcgcacaaatt
gacaaaactacaaaaacactgatcaacaaaccaagagtatttagctatgggctagtagct
gacaaacacgatcatgcttttagcaaagatatggctgaagttttaggacaatttttcatc
aatgttaaagatgaagtactcaatgatccaagatttttagaaaatcaaatccgccaagtt
ttaagaaaacacatctttagaaagattaaaaaatacccaaccatagttccaactattttt
gtaatgtaa
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