Campylobacter jejuni RM1221: CJE0502
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Entry
CJE0502 CDS
T00227
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cjr
Campylobacter jejuni RM1221
Pathway
cjr03030
DNA replication
cjr03430
Mismatch repair
cjr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJE0502
03430 Mismatch repair
CJE0502
03440 Homologous recombination
CJE0502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjr03032
]
CJE0502
03400 DNA repair and recombination proteins [BR:
cjr03400
]
CJE0502
Enzymes [BR:
cjr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJE0502
DNA replication proteins [BR:
cjr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJE0502
DNA repair and recombination proteins [BR:
cjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJE0502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
TMP_N
Motif
Other DBs
NCBI-ProteinID:
AAW35089
LinkDB
All DBs
Position
455855..456556
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AA seq
233 aa
AA seq
DB search
MQEFAKVEELKNFDLDLETFELLGLGLTLNKDNIFILKTRTTKIKDEIFCIVDIESTGGV
SKGEILEIGAVKIQNSKEIGRFQSFVKVKEIPENITELTGITYEMVENAPSLTKVLSDFR
LFLKDSIFVAHNVRFDYSFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEF
LGVENTHHRALDDALAAAEIFKYCLGKLPYHIKTTEELINFTKTATHKAKINI
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagtttgccaaagttgaagaattaaaaaattttgatttagatttggaaactttt
gagcttttgggtttgggcttaactttgaataaagataatatttttatccttaaaacacgc
acaacaaaaattaaagatgaaattttttgtatagtagatatagaaagtactggcggtgta
agcaagggggaaattttagaaattggagcagtaaaaattcaaaattctaaagaaattgga
cgctttcaaagttttgttaaagtaaaagaaattccagaaaatataaccgaacttacgggt
attacttatgagatggtggaaaatgctccaagtttaacaaaggttttaagtgattttagg
ctttttttaaaagacagtatttttgtagcacataatgtgcgttttgattatagttttatt
tctaaggctttaaatgagtgtggttttggcattttacttaatcgtcgtatttgtactata
gaatttgcacaatgttgtatagaaagtccaaaatataaactagaggttttgaaagaattt
ctgggcgtggaaaatacgcatcatagggctttagatgatgctttggcagctgctgaaatt
tttaaatattgccttggaaaacttccctatcatataaaaactacagaagaacttataaat
tttacaaagactgccacgcataaagcaaaaataaatatttaa
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