| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase beta subunit
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| KO |
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| Organism |
cjs Campylobacter jejuni subsp. jejuni S3
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cjs00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJS3_0470 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cjs03021]
CJS3_0470 (rpoB)
03400 DNA repair and recombination proteins [BR:cjs03400]
CJS3_0470 (rpoB)
Enzymes [BR:cjs01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJS3_0470 (rpoB)
Transcription machinery [BR:cjs03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJS3_0470 (rpoB)
DNA repair and recombination proteins [BR:cjs03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJS3_0470 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
439127..443254
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| AA seq |
1375 aa
MLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLDNGESGIEKVFKSIFPIHDP
QNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIRLTLHEKDEKTGEKVGVKDIKE
QEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESSTVANKLVYTAQIIPDR
GSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGYKKQDIIKLFYPIQTIHVKKDKFLTE
FNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKKAEQLIKDGLKWIEYPVEILLNRYLANP
IIDKESGEVLFDSLTLLDESKLAKIKEQKSFDIANDLANGVDAAIINSFAQDGETLKLLK
QSENIDDENDLAAIRIYKVMRPGEPVVKDAAKAFVNDLFFNPERYDLTKVGRMKMNHKLG
LEVPEYVTVLTNEDIIKTAKYLIKVKNGKGHIDDRDHLGNRRIRSIGELLANELHLGLAK
MQKAIRDKFTSLNADLDKVMPYDLINPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKR
RLSALGEGGLVKERAGFEVRDVHATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVE
APYRKVVNGKVTNEVVYLTATQEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARRE
EVQLIDLCSGMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQII
ARDAWEAVKAKRGGVVEKVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVK
KGDIVKAGQIIADGPSMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVH
IYEKEIEARELKDGIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGE
VKPTPEERLLRAIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKE
KMALEKEHHDRLLMMDREEMLRVCALLSKASLNSDQKIGDKNYKKGQTADISELEKINRF
TLTTLIKAYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYI
ATKRKLKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILE
SHLGLVGLRLGDQIQEIFDRKQKDFLKELRAKMLEICSIPRLANEKEFIKSLSDEELLNY
ARDWSKGVKFSTPVFEGVNIEEFSKLFKMAKIDMDGKTELYDGRTGEKIAERVHVGCMYM
LKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLT
IKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE |
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| NT seq |
4128 nt +upstreamnt +downstreamnt
atgttagataataaattaggaaatcgtttaagagtagacttctcaaacatttcaaaacaa
atagaaatcccaaatcttctacaattacaaaaaaagagttttgattattttttaaatctt
gataatggtgaaagtggtatagaaaaagtttttaaatcaatttttcctattcatgatccg
caaaatagattgagtcttgaatatgttagtagtgaaataggcaagccaaaatataccatt
cgcgaatgcatggaaagaggtttgacttattctgtaaatttaaaaatgaaaatccgtctt
actctgcatgaaaaagatgaaaaaacaggggaaaaagttggcgtaaaagatattaaagaa
caagaaatttatatccgcgaaattcctttaatgacagatcgtgtatcttttatcattaat
ggggttgagagggtggttgtaaatcaattacatagaagtcctggtgttatttttaaagaa
gaagaaagttcaacggttgcaaataagcttgtttatacagcacaaattattcctgatcgt
ggttcgtggctttattttgaatacgatgccaaagatgttttgtatgtaagaatcaataag
cgtagaaaagttcctgtaactatgctttttagagctttagggtataaaaaacaagatatt
attaagttgttttatcctattcagactatacatgtgaaaaaagataaatttttaacagaa
tttaatccaaatgattttatggatagaatagaatatgatattaaagatgaaaaaggaaaa
atcgttcatcaagctggaaaaagacttacaaagaaaaaagcagaacagcttattaaagac
ggtttaaaatggatagaatatcctgtagaaattttacttaatcgttatttagcaaatcct
attattgataaagaaagtggagaggttttatttgattctttaactttgttagatgagagt
aagcttgctaagattaaagagcaaaaaagttttgatatagcaaatgacttggctaatggc
gttgatgcagcgattattaactcctttgctcaagatggagaaactctaaaacttcttaaa
caaagtgaaaatatcgatgatgaaaatgatttagctgcgattagaatttacaaagttatg
cgcccaggtgaacctgtggtaaaagatgcagcgaaggcttttgtaaatgatttattcttc
aatcctgaaagatacgatcttactaaggtaggtcgtatgaaaatgaaccataagttaggt
cttgaagtgcctgagtatgttactgttttgactaatgaagatattattaaaactgcaaaa
tatttaattaaagtaaaaaatggtaaaggacatattgatgatagagatcatttaggaaat
cgtcgtatccgttctataggtgaacttttagctaatgaacttcatttaggtcttgcaaaa
atgcaaaaggcgatcagagataaatttacttctttaaatgcggatcttgataaagtaatg
ccttatgatttaatcaatcctaaaatgattactacaactatcattgaattttttacagga
ggtcagctttcgcaatttatggatcaaaccaaccctttaagcgaggttactcataagcgt
cgtttgtcagcgcttggtgaaggtggacttgtaaaagaaagagcaggttttgaagtgcgt
gatgttcacgcgacacattatggtagaatttgtccagttgaaacacctgaaggtcaaaat
attggtttgattaacactctttctacttatgcaaaagtaaatgaacttggctttgttgaa
gcgccatatagaaaagttgtaaatggtaaagtgactaatgaagttgtttatcttacagcg
acacaagaagaaggcttgtttatcgcaccagcttcaactaaggttgatgctaaaggcaat
atagtagaagaatttgttgaggctaggcaagatggtgaaactatacttgcaagacgcgaa
gaagtgcaattaatcgatctttgctcaggtatggttgttggagttgcagcttctttgatt
ccgtttttagagcacgatgatgcaaacagagcgctaatgggttcaaacatgcaacgtcaa
gctgtgccacttcttactgcttcagctccgatagtaggaacaggtatggaacaaattatt
gcgcgtgatgcttgggaagctgttaaagcaaagcgtggcggtgtggttgagaaagtggat
aataaaagcattttcattttaggtgaagatgataaaggtccatttattgaccattacact
atggagaaaaatttaagaaccaatcaaaatacaaattatattcaacaccctattgttaaa
aaaggtgatatagtaaaagcaggacaaattatcgcagatggtccttctatggatcaaggc
gaacttgctataggtaaaaatgctttaatcgcttttatgccttggaatggttataactat
gaggatgctatagttgtaagtgagagaattattcgtgaagatacttttacaagcgtgcac
atttatgaaaaagaaattgaagcaagagaactaaaagacggtatagaagaaattaccaaa
gatattccaaatgtaaaagaagaagatgttgcgcatcttgatgagagcggtattgcaaaa
attggtacccatatcaaaccaggtatgattttggtgggtaaggtttctccaaaaggtgag
gttaaaccaactcctgaagaaagacttttaagagcgatttttggagaaaaagcaggacat
gttgtgaataaatccctttatgcaaccgcttctttagagggtgttgttgtggatgttaaa
attttcactaaaaaaggctatgaaaaagatgatcgcgcaataaaatcttatgataaagaa
aaaatggctttagaaaaagagcatcatgatagacttttgatgatggatagagaagaaatg
cttcgtgtttgtgctcttctttccaaagcctctttaaatagcgatcaaaaaattggagat
aaaaattataaaaaaggacaaactgcagatattagcgaacttgaaaaaatcaatcgtttt
actttaacaactttgattaaagcttattctaaagagattcaaaaagaatacgatgattta
aaaaatcatttccaaaatgagaagaaaaaattaaaagcagaacacgatgaaaagcttgaa
attttagaaaaagatgatattttaccaagtggggtaattaagcttgttaaagtttatatt
gctacaaaaagaaagcttaaagtcggtgataaaatggcaggacgtcatggaaataaaggt
atagtttcaactatagttcctgaagtagatatgccttatttgccaaatggtaagagtgtg
gatattgcgcttaatccacttggcgttccaagtcgtatgaatataggtcaaattttagaa
agtcatttaggtttagttggacttagacttggggatcaaattcaagaaatttttgataga
aagcaaaaagattttcttaaagaattaagagcgaaaatgcttgaaatttgttctattcca
agacttgcaaacgaaaaagaatttattaaaagcttaagcgatgaagagcttttaaactat
gctagagactggagtaaaggagttaaattttctactcctgtttttgaaggtgtaaatata
gaagaatttagcaagctttttaaaatggctaagatagatatggatggcaaaacagaactt
tatgatggacgcacgggggaaaaaattgcagagcgtgttcatgtaggatgtatgtatatg
ctaaaactccatcacttggttgatgaaaaagttcatgcaagaagtacaggaccttatagc
ttggttacccaacaacctgtgggtggtaaagcactctttgggggacaaagatttggagaa
atggaagtttgggcacttgaagcttatggagcggctcacactttaagagaaatgttaacc
ataaaatcagatgatgtagaaggtagatttagtgcttataaagcattgacaaaaggtgaa
aatgttccagcaacaggaattcctgaaacattttttgtattaaccaatgagcttaaatct
cttgctttagatgttgagatttttgataaggatgaagataatgagtaa |
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