Chryseobacterium joostei: EG359_04495
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Entry
EG359_04495 CDS
T06494
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cjt
Chryseobacterium joostei
Pathway
cjt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EG359_04495 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjt03019
]
EG359_04495 (recQ)
03400 DNA repair and recombination proteins [BR:
cjt03400
]
EG359_04495 (recQ)
Enzymes [BR:
cjt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG359_04495 (recQ)
Messenger RNA biogenesis [BR:
cjt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EG359_04495 (recQ)
DNA repair and recombination proteins [BR:
cjt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EG359_04495 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
AZA98910
UniProt:
A0A1N7HW34
LinkDB
All DBs
Position
complement(945800..948004)
Genome browser
AA seq
734 aa
AA seq
DB search
MSAKKANLSGELKKYFGFSTFKGQQEQIIENLLNGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSENGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKDDYLDFLKEVKISFFAIDEAHCISEWGHDFRPEYRNLKQIIDKIANVPVIALTA
TATPKVQDDIQKTLGMTNALVFKESFNRPNLYYEVCPKINIDREIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGEIFDPVNGDGAKMCDNSFNPPKLKDATADLKKV
LELINDTGEKFKSKDLISVIVGKETAVTKSYKLEQNPHFSFGKDEKENYWKTILRQATVQ
NYLQKDIETYGVLKISEKGREVLSGKSKDTFLITEDREFDLTQAKADSDQVQQQAAGGLD
QNLFNLLKELRKKVAKKYGIPPYTVFMDPSLEDMTVQYPITVDEITKIYGVGEGKAKKYG
KEFADYIKTYVEDNNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLSMDE
LLKEMERIVYQGTKLNIDYYIEDNFDEDIVDGFMEFMNESESDSMKVLLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccaatttatcgggcgaattgaaaaagtattttgggttttctaca
tttaagggacaacaggaacaaatcatagaaaacctattgaatgggaaggatatatttgtt
ttgatgcctacaggtggtggtaaatcattatgttatcagcttccggcacttatttcggaa
ggtacggcaatagttgtatcacctttaatcgcgttaatgaaaaatcaggtagatgccgta
aacgggctttcatctgagaatggggtagcgcatgtattaaattcatcattaaacaagaca
cagacaaaacaagtttttgacgacataaaaagcggaaaaaccaaacttttgtatgtagct
cctgaatcattgattaaggatgattatctggactttttgaaagaagttaagatttctttc
tttgctattgatgaagcacactgtatttcagagtggggacatgatttcagacctgaatac
aggaacttgaaacagattattgataagattgccaatgtaccggtgatcgccttaacggca
acagcaacgccaaaggttcaggatgatatccaaaagacgttgggtatgacgaatgccttg
gtctttaaagagagttttaaccgtcctaatctatattatgaggtatgccctaaaataaat
atagatagggagattgttaaatttatcaatcagcataaagggaaatctggaatcgtatat
tgcctgagcagaagaaaagtggaagaatttgcccagcttttgcaggtaaacggaatcaat
gctcttccttatcacgctggtcttgatcaaaaggtaagggttgccaatcaggataaattc
ctgatggaggaagtggatgttattgttgcaaccattgcatttgggatgggaattgacaag
ccggatgttcgtttcgtgattcattatgatttcccgaaatctctggaaagttattatcag
gaaaccggaagagcgggaagagacggtggtgaaggtcattgtttggcattctacgatccc
aaggatattgaaaaacttgagaaattcctggcacaaaaacctgtttctgaaagagaaatc
ggattgcagcttttgaacgaagtagtaggttatgccgaaacttcaatgagtagaagacaa
tatatcctgtattattttggagaaatctttgaccctgtgaatggagacggagcgaagatg
tgtgataactcattcaatcctccaaaattaaaggatgctactgcagatctaaaaaaagtg
cttgaactgattaatgataccggagaaaaattcaagtcaaaagatttgatttctgttatc
gttggaaaggaaacagctgttacaaaatcttataaactggagcagaatcctcattttagc
ttcggaaaagatgaaaaggagaactattggaaaacaattctgagacaggctaccgttcag
aattatctgcaaaaagatattgaaacatacggtgttctaaagatttcagaaaaagggcga
gaggttttaagtggtaaatccaaggatactttcttaattacagaagatagagagtttgat
cttacacaagctaaggcagacagtgatcaggtacaacagcaggctgccggaggcttagat
caaaacctgttcaatctactaaaagaattaaggaaaaaagtagctaaaaagtatggtatt
ccaccttatacagtctttatggatccaagtttggaagatatgactgtacagtatcctatt
actgtagatgaaatcactaagatttatggtgtaggagagggaaaagccaaaaaatatggt
aaggaattcgctgactatatcaaaacctatgttgaagataacaatatagagcgtacacag
gatatggttttgaaacaggttgccaataaatccagccacaaggtttttattattcagagt
accgataagaaaattgaccttgaagatatagcaagagccaagaatctttctatggacgaa
ctgttgaaagaaatggaacgaattgtctaccagggaacaaaactgaatattgattattat
atcgaagataactttgatgaagatattgttgatggttttatggaatttatgaacgaatca
gagagtgatagtatgaaagtattgcttgatgaattcggagatgaattatctgatgaggaa
gtgagaatgctgagaatcaaatttatcagcgacgttgcaaattaa
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