Chryseobacterium joostei: EG359_19990
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Entry
EG359_19990 CDS
T06494
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cjt
Chryseobacterium joostei
Pathway
cjt03030
DNA replication
cjt03410
Base excision repair
cjt03420
Nucleotide excision repair
cjt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EG359_19990 (polA)
03410 Base excision repair
EG359_19990 (polA)
03420 Nucleotide excision repair
EG359_19990 (polA)
03440 Homologous recombination
EG359_19990 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjt03032
]
EG359_19990 (polA)
03400 DNA repair and recombination proteins [BR:
cjt03400
]
EG359_19990 (polA)
Enzymes [BR:
cjt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EG359_19990 (polA)
DNA replication proteins [BR:
cjt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EG359_19990 (polA)
DNA repair and recombination proteins [BR:
cjt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EG359_19990 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EG359_19990 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DUF2202
DUF1198
Motif
Other DBs
NCBI-ProteinID:
AZB01744
UniProt:
A0A1N7J616
LinkDB
All DBs
Position
4330206..4333040
Genome browser
AA seq
944 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRNPRLTSKGLDTSAIFGFTNSLIELIRREKPSHL
AVVFDVGRASVRTDDFADYKANRSETPEAIKIAVPYIHRILEGMHIPILGVEGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVEEVKAKYEIEDP
KQVIDYLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGSIENLLANTDKLKGKLKEKVEASA
ERGILSKKLATIICDVPVEFHQEQYDLETPDFEKVKEVFEEIEFRRLYENLYRAFASAPV
ETVIESEVEVKQSPTSAEVKGQAMQLDLFANFEELDQATTTKTSIEHNDHLYQFIDNPKA
QRKLVENLLKQKSVCFDTETTSLNELEAELVGMSFSYKKGLAYYIPLSEDRDEVLKTLEI
FRPFFEKEDLLKIAHNLKFDYKILKQYDITVKGAMFDTMIAHYLLNPDGRHGMDYLSEVY
LNYKPVSIETIIGKKGKKQGNFRDADLRTQTDYAAEDADVTFQLYELFAPQLKKENLEEL
FFNIEMPLMEVLAKMELTGISLDEKWLAQESIDLENDLKQLETTIFELSEEEFNMNSPKQ
LGEILFEKMQLDPKAKKTKTGQYATSEDVLQKLASKHEIIKHILEYRTYQKLKSTYVDAL
PSQIDKHDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVSGEGKKIISA
DYSQIELRLIAEISGEDNMIKAFQDGEDIHASTAAKLFKIPLEEVSKTQRSQAKTVNFGI
IYGQGAFALAEQTGLSRTEAKQMIEAYFETYPKLKEYMAEQVNKARQQGYVETILGRKRH
LKDINSNNFVVRGHAERNAVNAPVQGSAADVVKLAMIKIDRELDEQQLKTKMLLQVHDEL
VFESPIDEIESASKLIKTEMENALKTQVPLLVEIGVGDNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaacacaagataaaaggctgtttctcatcgatgcctatgcgatgattttcaga
ggatattacgcattgatcaggaatccgaggttaacaagtaaaggactggatacttccgcg
atttttggttttaccaactcattgatcgaattgatcagaagagaaaagccaagccatctg
gcggtggtttttgacgtgggaagagcaagcgtaagaaccgatgacttcgcagattacaaa
gccaacagaagtgaaactcctgaagccattaaaattgctgttccatacattcacagaatt
cttgaaggaatgcatattcctattctgggcgtagaaggatatgaagcagatgacgtgata
ggtaccattgcctgcaaggcagaaaaagaaggatataccacttttatggtaactccggat
aaagactttgcacagctggtaacagataaaatcaagatttataaacccggtttaaaaggc
ggagatattgaaattctaggagtagaagaagttaaggcaaaatatgaaattgaagaccct
aagcaggttatagattatttggccatgatgggtgatgcagtggataatattcctggcttg
gagggtgtaggagaaaagactgccatgaagttcctgaaagaattcggaagcattgaaaat
ctactggcaaataccgataaactgaaaggaaagctaaaagaaaaagtagaagcctctgct
gaacggggaattttgtccaaaaaactagcaaccattatctgtgatgttcctgtagaattc
catcaagaacaatacgaccttgaaactccggattttgaaaaagtaaaagaagtttttgaa
gaaattgaattcagaagactgtatgaaaatctttacagagcttttgcttctgcacctgta
gaaactgtgatagaaagcgaagtagaagtaaagcagtccccaacaagtgctgaggtaaaa
ggacaggcaatgcaacttgatctttttgccaactttgaagagctggatcaggctaccact
acaaaaacttctattgagcacaatgatcacctttatcagttcatagacaatccaaaggct
cagagaaagctggtagaaaacctgttgaaacaaaaatccgtttgttttgatacagaaacc
acttcattaaatgagctggaagcagaactggtgggaatgagcttttcctacaaaaaagga
ctggcgtattatattccactatctgaagacagagatgaagttttgaagactttggaaatt
ttcagaccgttttttgaaaaagaagacctgctgaaaattgcccacaacttaaaattcgat
tataaaatattaaagcaatacgacatcactgttaaaggtgccatgttcgataccatgatt
gcccattatctgttgaatccggacggaagacacggtatggattatctatcagaagtatac
ctgaactataagcccgtctccattgaaactatcattggaaagaaaggtaaaaaacaagga
aacttcagagatgctgacctaagaacccagacagattatgctgctgaagatgcagacgta
acattccaattgtatgagttatttgctccacaattgaaaaaagaaaatctggaagaactt
ttctttaacatagaaatgcctctgatggaagttctggccaaaatggaacttacaggaatt
tctctggacgagaaatggctggctcaggaaagtattgatcttgaaaatgatctgaaacaa
ttagaaactacaatttttgaactttcagaagaagaattcaacatgaactcaccaaaacaa
ttgggtgaaattttgtttgaaaagatgcagcttgatccaaaggcaaagaaaacaaagacc
ggacagtacgctacctcagaagatgtacttcaaaaattggcctcaaaacatgagattatc
aagcatatcctggaatacagaacctaccagaagctaaaatcaacctatgtagatgctttg
ccgtcacagattgacaaacatgataacagggtacataccaacttctcacagactacagcg
gctacaggtcgtttggcaagtgtgaatcctaacctgcagaatattccgatcagaacattg
agaggacaacaaattcgtggagcttttgtttcaggagaaggaaagaagattatttctgcc
gattattcacagattgagcttcgccttatcgctgaaatttcaggagaagataacatgatc
aaggctttccaggatggtgaagatattcacgcttccacagcagctaagctattcaaaatt
cctttggaagaggtttctaaaacacagagaagccaagctaaaacagtaaactttggtatt
atctacggtcagggtgcttttgcattggcagagcaaaccggattgtctcgtactgaagcc
aagcagatgattgaagcttattttgaaacctatccaaaactgaaagaatacatggcagag
caggtgaataaagcccgtcagcaaggatatgtagaaacaattttaggaagaaaacgtcat
ttaaaagatatcaattccaacaatttcgttgtgagagggcacgcagaaagaaatgcggta
aacgctccggttcagggaagtgctgcggatgttgtaaaactggcgatgattaaaatcgat
agagaactggatgaacagcaattaaaaacaaaaatgctgcttcaggtacatgacgaattg
gtatttgaatccccgattgatgaaattgagtctgcttcaaaactgatcaaaactgaaatg
gaaaatgccttaaaaacacaggttccattgttggtagagattggggtaggagataactgg
ctggaagctcattaa
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